RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 DNAJA3Q96EY1 480 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 NRBF2Q96F24 287 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 PRRG4Q9BZD6 226 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 NANSQ9NR45 359 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SH3BGRL2Q9UJC5 107 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ING1Q9UK53 422 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 TMCC3Q9ULS5 477 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SLC5A6Q9Y289 635 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 RELNP78509 3460 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 IGKV3D-15A0A087WSY6 115 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ARRDC5A6NEK1 342 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 WIPF3A6NGB9 483 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF716A6NP11 495 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 HSPB2A8KAH6 182 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF724A8MTY0 619 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 LRRN3E7EW58 273 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 MS4A18H0YCH9 400 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 KLF4O43474 513 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 OR7A10O76100 309 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 IL18BPO95998 194 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 IFI30P13284 250 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 KLK2P20151 261 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 MAKP20794 623 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 PTNP21246 168 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 IFNGR2P38484 337 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 HSPB2Q16082 182 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 MICAQ29983 383 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 EXOC3L2Q2M3D2 409 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 MS4A18Q3C1V0 323 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 OTUD3Q5T2D3 398 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 NHLRC1Q6VVB1 395 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 P4HA3Q7Z4N8 544 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 FJX1Q86VR8 437 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 LRRC17Q8N6Y2 441 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 OR5J2Q8NH18 312 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 PIGXQ8TBF5 258 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ABHD3Q8WU67 409 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 PYDC1Q8WXC3 89 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 RND1Q92730 232 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 GMPPAQ96IJ6 420 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 PSD2Q9BQI7 771 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 BDH2Q9BUT1 245 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ASPNQ9BXN1 380 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 S100A14Q9HCY8 104 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-219ENST00000555323 RASD1Q9Y272 281 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 TMEM5Q9Y2B1 443 aa11.31□□□□□ -0.6
SYNE2-219ENST00000555323 IGHV3-15A0A0B4J1V0 119 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 A0A0G2JNJ9 132 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 CLEC18AA5D8T8 446 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 M0R082 166 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 PLPP3O14495 311 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 GNGT2O14610 69 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 PIP5K1CO60331 668 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 RAMP1O60894 148 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 SS18L1O75177 396 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-219ENST00000555323 PTP4A3O75365 173 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 LDLRP01130 860 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 AGAP20933 346 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 CTSSP25774 331 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 SLC9A3P48764 834 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 RASGEF1BQ0VAM2 473 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 FHL1Q13642 323 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 TMEM179BQ7Z7N9 219 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 C10orf53Q8N6V4 93 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 CLEC18CQ8NCF0 446 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 NAXEQ8NCW5 288 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 CCDC120Q96HB5 630 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 OXGR1Q96P68 337 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-219ENST00000555323 TACO1Q9BSH4 297 aaKnown RBP11.3□□□□□ -0.6
SYNE2-219ENST00000555323 KRCC1Q9NPI7 259 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-219ENST00000555323 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 Q9UFV3 132 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-219ENST00000555323 HIF3AQ9Y2N7 669 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 U3KQV3 271 aa11.3□□□□□ -0.6
SYNE2-219ENST00000555323 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms