RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 RASD1Q9Y272 281 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 NSD1Q96L73 2696 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 IGKV3D-15A0A087WSY6 115 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 NKX2-6A6NCS4 301 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 OR6C65A6NJZ3 312 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 KDM4EB2RXH2 506 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 HNRNPRO43390 633 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 TPST2O60704 377 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 MRPL33O75394 65 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 UBOX5O94941 541 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 IGF2P01344 180 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 COX6B1P14854 86 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 UQCRC1P31930 480 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 RPS5P46782 204 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 OR1E2P47887 323 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SLC16A1P53985 500 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SIRPAP78324 504 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SORDQ00796 357 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 TRAP1Q12931 704 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 GUSBP1Q15486 140 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 OTUD3Q5T2D3 398 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SPNS3Q6ZMD2 512 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 RINLQ6ZS11 566 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 BTLAQ7Z6A9 289 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 DHFR2Q86XF0 187 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF100Q8IYN0 542 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 CDK20Q8IZL9 346 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 RNF113BQ8IZP6 322 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SCAIQ8N9R8 606 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 ABHD3Q8WU67 409 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SLC25A36Q96CQ1 311 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 PRRC1Q96M27 445 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 THTPAQ9BU02 230 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 TRIM15Q9C019 465 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 SLC7A7Q9UM01 511 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 NOSIPQ9Y314 301 aaKnown RBP9.44□□□□□ -0.9
TMEM260-206ENST00000555046 MED31Q9Y3C7 131 aa9.44□□□□□ -0.9
TMEM260-206ENST00000555046 MAP1AP78559 2803 aaPredicted RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 MED12Q93074 2177 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 LOC102725191A0A1B0GVB3 256 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ZC3H12DA2A288 527 aaKnown RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 AQP7P3A6NL99 342 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 CASKO14936 926 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 DNAJC8O75937 253 aaPredicted RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 OR6A2O95222 327 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 CGAP01215 116 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 IMPDH2P12268 514 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 PPP3CBP16298 524 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 NCK1P16333 377 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF43P17038 809 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 RHCEP18577 417 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 BNIP1Q12981 228 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 PMS2P3Q13401 168 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 PIN1Q13526 163 aaPredicted RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 C1DQ13901 141 aaKnown RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 TRAM2Q15035 370 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 P2RY6Q15077 328 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 TAF11Q15544 211 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 PLXDC2Q6UX71 529 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 SSX8Q7RTT4 187 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 LUZP2Q86TE4 346 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 RBM45Q8IUH3 476 aaKnown RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF610Q8N9Z0 462 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ADPRHL1Q8NDY3 354 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 TAAR8Q969N4 342 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ASB9Q96DX5 294 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 KTI12Q96EK9 354 aaPredicted RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 OXGR1Q96P68 337 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF347Q96SE7 839 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 PSD2Q9BQI7 771 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 WFDC6Q9BQY6 131 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ENKD1Q9H0I2 346 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ANKRD19PQ9H560 264 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 KRCC1Q9NPI7 259 aaPredicted RBP9.43□□□□□ -0.9
TMEM260-206ENST00000555046 NANSQ9NR45 359 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 ENPP4Q9Y6X5 453 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 FREM3P0C091 2139 aa9.43□□□□□ -0.9
TMEM260-206ENST00000555046 IGHV3-15A0A0B4J1V0 119 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 TUBAL3A6NHL2 446 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 C16orf97H3BN30 126 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 EBAG9O00559 213 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 ARPC2O15144 300 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 AKR7A3O95154 331 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 MT-ND1P03886 318 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 POU2F1P14859 743 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 NQO1P15559 274 aaKnown RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 AGTR1P30556 359 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 CD79BP40259 229 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 KIR2DL3P43628 341 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 EGR4Q05215 589 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 TFF3Q07654 80 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 SLC17A1Q14916 467 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 POU4F3Q15319 338 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 ABLIM2Q6H8Q1 611 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms