RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HIKESHIQ53FT3 197 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF311Q5JNZ3 666 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 RPS26P11Q5JNZ5 115 aaPredicted RBP16.4■□□□□ 0.22
CPSF2-203ENST00000554290 PRAMEF8Q5VWM4 474 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 PRAMEF7Q5VXH5 474 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 LSRQ86X29 649 aaPredicted RBP16.4■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF525Q8N782 197 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 SLC35B4Q969S0 331 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 VPS33AQ96AX1 596 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 MOKQ9UQ07 419 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 CHD3Q12873 2000 aaKnown RBP16.4■□□□□ 0.22
CPSF2-203ENST00000554290 NPIPB7O75200 414 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 P2RY4P51582 365 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 UBE2NP61088 152 aaKnown RBP16.39■□□□□ 0.21
CPSF2-203ENST00000554290 RGNQ15493 299 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 SERPINA11Q86U17 422 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 OR1K1Q8NGR3 316 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 MFSD8Q8NHS3 518 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 GTF2H4Q92759 462 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 C3orf49Q96BT1 292 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 OR52B2Q96RD2 323 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 MOV10Q9HCE1 1003 aaKnown RBP16.39■□□□□ 0.21
CPSF2-203ENST00000554290 CR1P17927 2039 aa16.39■□□□□ 0.21
CPSF2-203ENST00000554290 A0A096LNT2 108 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 TMEM229AB2RXF0 380 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 C5orf58C9J3I9 102 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 CLIC1O00299 241 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 F12P00748 615 aaPredicted RBP16.38■□□□□ 0.21
CPSF2-203ENST00000554290 CRYAAP02489 173 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 GTF2E2P29084 291 aaKnown RBP16.38■□□□□ 0.21
CPSF2-203ENST00000554290 SELENOPP49908 381 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 VLDLRP98155 873 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 FADDQ13158 208 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 TBRG1Q3YBR2 411 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 NIPAL3Q6P499 406 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 MAVSQ7Z434 540 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 OR9I1Q8NGQ6 314 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 BBS10Q8TAM1 723 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 C10orf105Q8TEF2 133 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 PROX1Q92786 737 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 SLC25A36Q96CQ1 311 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 FBXO17Q96EF6 278 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 ZNF317Q96PQ6 595 aaPredicted RBP16.38■□□□□ 0.21
CPSF2-203ENST00000554290 BCL2L10Q9HD36 194 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 A4GALTQ9NPC4 353 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 RPS6KB2Q9UBS0 482 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 CHST2Q9Y4C5 530 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 PCDHB14Q9Y5E9 798 aa16.38■□□□□ 0.21
CPSF2-203ENST00000554290 SONP18583 2426 aaKnown RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 ABCA1O95477 2261 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 LGI1O95970 557 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 SH3BGRP55822 239 aaPredicted RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 STX1BP61266 288 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 EPHX4Q8IUS5 362 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 BCL2L2Q92843 193 aaPredicted RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 SLC38A2Q96QD8 506 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 KATNB1Q9BVA0 655 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 LINC00470Q9BZP3 86 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 PAIP1Q9H074 479 aaKnown RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 CDC42EP3Q9UKI2 254 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 FKBP7Q9Y680 259 aa16.37■□□□□ 0.21
CPSF2-203ENST00000554290 FBN1P35555 2871 aaKnown RBP16.37■□□□□ 0.21
CPSF2-203ENST00000554290 IGHV1-18A0A0C4DH31 117 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 OR2T1O43869 369 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 NUDT7P0C024 238 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 PNMTP11086 282 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 BMP2P12643 396 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 HOXB1P14653 301 aaPredicted RBP16.36■□□□□ 0.21
CPSF2-203ENST00000554290 ETS2P15036 469 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 ZNF43P17038 809 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 RPS5P46782 204 aaKnown RBP16.36■□□□□ 0.21
CPSF2-203ENST00000554290 SNRPD2P62316 118 aaKnown RBP16.36■□□□□ 0.21
CPSF2-203ENST00000554290 HOXC5Q00444 222 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 LGALS3BPQ08380 585 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 SWI5Q1ZZU3 235 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 CYB5R2Q6BCY4 276 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 ANKRD16Q6P6B7 361 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 SLC2A7Q6PXP3 512 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 C5orf46Q6UWT4 87 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 ANKK1Q8NFD2 765 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 MAGEE2Q8TD90 523 aaPredicted RBP16.36■□□□□ 0.21
CPSF2-203ENST00000554290 NANOS1Q8WY41 292 aaKnown RBP16.36■□□□□ 0.21
CPSF2-203ENST00000554290 MAL2Q969L2 176 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 KCNK17Q96T54 332 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 RCE1Q9Y256 329 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 USH1CQ9Y6N9 552 aa16.36■□□□□ 0.21
CPSF2-203ENST00000554290 ATRQ13535 2644 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 PLCE1Q9P212 2302 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 ARPC4-TTLL3A0A0A6YYG9 625 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 FTCDNL1E5RQL4 147 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 ERLIN1O75477 346 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 USF1P22415 310 aaPredicted RBP16.35■□□□□ 0.21
CPSF2-203ENST00000554290 SERPINF1P36955 418 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 ROR2Q01974 943 aaKnown RBP16.35■□□□□ 0.21
CPSF2-203ENST00000554290 C1DQ13901 141 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms