RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 A8MVM7 634 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 K7ENP7 123 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ACOT7O00154 380 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 EI24O14681 340 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SLC16A6O15403 523 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF208O43345 1280 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TLX3O43711 291 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 MPZL2O60487 215 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 HCN1O60741 890 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF354AO60765 605 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CEACAM4O75871 244 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 WDPCPO95876 746 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SP1P08047 785 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CCL3P10147 92 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 IFI30P13284 250 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OSMP13725 252 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PRG2P13727 222 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 HK1P19367 917 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FUT1P19526 365 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 DPP4P27487 766 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TACR3P29371 465 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SRD5A2P31213 254 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CAPGP40121 348 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PTGDSP41222 190 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SELENOPP49908 381 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 IST1P53990 364 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CRISP1P54107 249 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 DLX5P56178 289 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CTBP2P56545 445 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TMPRSS3P57727 454 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PRPS1P60891 318 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CDC42P60953 191 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CSNK2BP67870 215 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PPP2R2BQ00005 443 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 HOXC5Q00444 222 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PLGLB1Q02325 96 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FOXD4Q12950 439 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PPP1R8Q12972 351 aaKnown RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 NPRL3Q12980 569 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 IL18R1Q13478 541 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 QPRTQ15274 297 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OR1C1Q15619 314 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ZBED5Q49AG3 693 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PDSS1Q5T2R2 415 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PRAMEF20Q5VT98 475 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TIGD3Q6B0B8 471 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SPINK14Q6IE38 97 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 KRT80Q6KB66 452 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FAHD1Q6P587 224 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 INO80CQ6PI98 192 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TBPL2Q6SJ96 375 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CBLN3Q6UW01 205 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 IGFL2Q6UWQ7 119 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 IGFL3Q6UXB1 125 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 LINC00696Q6ZRV3 163 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 RASSF6Q6ZTQ3 369 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TMPRSS11FQ6ZWK6 438 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM179BQ7Z7N9 219 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 NKAIN4Q8IVV8 208 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 Q8N1X5 172 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 PARP8Q8N3A8 854 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FADS6Q8N9I5 356 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 AQP11Q8NBQ7 271 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OR2M3Q8NG83 312 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OR6S1Q8NH40 331 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SLC25A43Q8WUT9 341 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 CYGBQ8WWM9 190 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OSTF1Q92882 214 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 C3orf49Q96BT1 292 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SGTBQ96EQ0 304 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 JSRP1Q96MG2 331 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SMAD5Q99717 465 aaKnown RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 APOL4Q9BPW4 351 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 WFDC6Q9BQY6 131 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TAPBPLQ9BX59 468 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 RSPO3Q9BXY4 272 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 YTHDF1Q9BYJ9 559 aaKnown RBP4.53□□□□□ -1.68
VTI1B-202ENST00000553619 POTEKPQ9BYX7 375 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SMURF2Q9HAU4 748 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 SH2D2AQ9NP31 389 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FAM118AQ9NWS6 357 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 FLRT3Q9NZU0 649 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 OSGIN1Q9UJX0 560 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 DKKL1Q9UK85 242 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 BAIAP2Q9UQB8 552 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF337Q9Y3M9 751 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 GMPPBQ9Y5P6 360 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 HSPE1-MOB4S4R3N1 261 aa4.53□□□□□ -1.68
VTI1B-202ENST00000553619 TRAV36DV7A0A075B6V5 113 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TRBV23-1A0A0A0MS06 115 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 TMED7-TICAM2A0A0A6YYA0 188 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 LOC100130705A0A1B0GUX0 176 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 SNTNA6NMZ2 147 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 EFCAB9A8MZ26 197 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 H3BN98 237 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 MASP2O00187 686 aa4.52□□□□□ -1.69
VTI1B-202ENST00000553619 IDH3BO43837 385 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms