RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SPRY1O43609 319 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 PGM3O95394 542 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 GKN3PP0CG01 181 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 TFPIP10646 304 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 IMPDH2P12268 514 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 PTAFRP25105 342 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 TACR3P29371 465 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 NTF4P34130 210 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 SLC16A1P53985 500 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 CHRNB3Q05901 458 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 ZSWIM7Q19AV6 140 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 RPS26P11Q5JNZ5 115 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 KLHL17Q6TDP4 642 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 IL17RELQ6ZVW7 336 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 LSRQ86X29 649 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 C10orf111Q8N326 155 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 CLIP4Q8N3C7 705 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 ZNF775Q96BV0 537 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 SPATA9Q9BWV2 254 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 RSPO3Q9BXY4 272 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 PLA2G12AQ9BZM1 189 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 ZNF385DQ9H6B1 395 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 CCDC134Q9H6E4 229 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 A4GALTQ9NPC4 353 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 VAPAQ9P0L0 249 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 PRSS50Q9UI38 385 aa10.37□□□□□ -0.75
SRP54-203ENST00000553544 ZNF443Q9Y2A4 671 aaPredicted RBP10.37□□□□□ -0.75
SRP54-203ENST00000553544 YLPM1P49750 1951 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 A0A0G2JND7 137 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 TMEM247A6NEH6 219 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 NR5A2O00482 541 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 TCF21O43680 179 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 VIMP08670 466 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 ARAFP10398 606 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 PRG2P13727 222 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 UQCRBP14927 111 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 GPX2P18283 190 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 CCNA2P20248 432 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 LARS2Q15031 903 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 AGKQ53H12 422 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 METTL21CQ5VZV1 264 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 ZNF544Q6NX49 715 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 DLEU7Q6UYE1 221 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 C12orf54Q6X4T0 127 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 GALNT5Q7Z7M9 940 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 CCDC103Q8IW40 242 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 RFLNBQ8N5W9 214 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 MAL2Q969L2 176 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 SLC35B4Q969S0 331 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 DDIT4LQ96D03 193 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 MSI2Q96DH6 328 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 ZHX1-C8orf76Q96EF9 292 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 NSRP1Q9H0G5 558 aaKnown RBP10.36□□□□□ -0.75
SRP54-203ENST00000553544 NPHS2Q9NP85 383 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 NPAP1Q9NZP6 1156 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
SRP54-203ENST00000553544 PLCE1Q9P212 2302 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 OR5H1A6NKK0 313 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 EIF1BO60739 113 aaKnown RBP10.35□□□□□ -0.75
SRP54-203ENST00000553544 TGFAP01135 160 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 ETS2P15036 469 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 COX5AP20674 150 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 IGHV1-2P23083 117 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 PPIBP23284 216 aaKnown RBP10.35□□□□□ -0.75
SRP54-203ENST00000553544 CD40P25942 277 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 MDH1P40925 334 aaKnown RBP10.35□□□□□ -0.75
SRP54-203ENST00000553544 OR2B6P58173 313 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 SLC35A1P78382 337 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 GGTLC2Q14390 218 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 WBP2NLQ6ICG8 309 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 SERPINA11Q86U17 422 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 ZNF100Q8IYN0 542 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 BBS10Q8TAM1 723 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 PIGXQ8TBF5 258 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 DNAJA3Q96EY1 480 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 IKZF5Q9H5V7 419 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 CACYBPQ9HB71 228 aaKnown RBP10.35□□□□□ -0.75
SRP54-203ENST00000553544 EMC3Q9P0I2 261 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 DCTN4Q9UJW0 460 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 CORO2BQ9UQ03 480 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 MALRD1Q5VYJ5 2156 aa10.35□□□□□ -0.75
SRP54-203ENST00000553544 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 CIB4A0PJX0 185 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 NDUFS8O00217 210 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 GPR171O14626 319 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 NPIPB7O75200 414 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 APEHP13798 732 aaKnown RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 CXCR1P25024 350 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 CFPP27918 469 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 APOBEC3AP31941 199 aaPredicted RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 NR4A2P43354 598 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 PDLIM4P50479 330 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ZNF83P51522 516 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ARFIP2P53365 341 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 SLC17A1Q14916 467 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 MAPRE2Q15555 327 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ADRM1Q16186 407 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ZNF311Q5JNZ3 666 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms