RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR2T12Q8NG77 320 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 OR6T1Q8NGN1 323 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 TAAR8Q969N4 342 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 TMEM43Q9BTV4 400 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 PTDSS2Q9BVG9 487 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 PRR14Q9BWN1 585 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 FAM107BQ9H098 131 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 LIME1Q9H400 295 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 ESRP2Q9H6T0 727 aaKnown RBP13.55□□□□□ -0.24
SHMT2-204ENST00000553324 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-204ENST00000553324 POLQO75417 2590 aa13.55□□□□□ -0.24
SHMT2-204ENST00000553324 LOC102725191A0A1B0GVB3 256 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-204ENST00000553324 CCT8L1PA6NM43 557 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 M0R3H8 397 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 SIAH2O43255 324 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 CHP2O43745 196 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ZNF43P17038 809 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 CD247P20963 164 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 DRD4P21917 467 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 PRDX6P30041 224 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 KDELR2P33947 212 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 P2RY4P51582 365 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ART1P52961 327 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 TESK1Q15569 626 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 TAB1Q15750 504 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ENTPD8Q5MY95 495 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ADPRHL1Q8NDY3 354 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 PLPPR2Q96GM1 343 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 WFDC6Q9BQY6 131 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 POLR2J2Q9GZM3 115 aaKnown RBP13.54□□□□□ -0.24
SHMT2-204ENST00000553324 POLR2J3Q9H1A7 115 aaKnown RBP13.54□□□□□ -0.24
SHMT2-204ENST00000553324 PLEKHA6Q9Y2H5 1048 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 SH3GLB1Q9Y371 365 aa13.54□□□□□ -0.24
SHMT2-204ENST00000553324 ABCA4P78363 2273 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 OTOGQ6ZRI0 2925 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 TRAPPC13A5PLN9 417 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 KRT33AO76009 404 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ATE1O95260 518 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 MT-ATP6P00846 226 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 IGHV3-9P01782 118 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 EDNRAP25101 427 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 MPGP29372 298 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 GNGT1P63211 74 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 PPA1Q15181 289 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 TSC22D1Q15714 1073 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 STK11Q15831 433 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ACKR1Q16570 336 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-204ENST00000553324 LINC00114Q6XXX2 140 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.53□□□□□ -0.24
SHMT2-204ENST00000553324 SLC15A3Q8IY34 581 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 SCAIQ8N9R8 606 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 C1orf162Q8NEQ5 155 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ADAMTS16Q8TE57 1224 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 LZICQ8WZA0 190 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 PIGTQ969N2 578 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ALPK1Q96QP1 1244 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 ASPNQ9BXN1 380 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 SLCO5A1Q9H2Y9 848 aa13.53□□□□□ -0.24
SHMT2-204ENST00000553324 IGKV1D-42A0A075B6H8 117 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 A0A1W2PPR1 153 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 AKAP8O43823 692 aaKnown RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 PAX7P23759 505 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 LOXP28300 417 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 GRPRP30550 384 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 IFNA8P32881 189 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 SELENOWP63302 87 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 C1DQ13901 141 aaKnown RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 NPTX1Q15818 432 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 ALKBH2Q6NS38 261 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 EPHX4Q8IUS5 362 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 C17orf78Q8N4C9 275 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 VANGL1Q8TAA9 524 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF385AQ96PM9 386 aaKnown RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 PIP5K1AQ99755 562 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 SLC19A3Q9BZV2 496 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 CXXC4Q9H2H0 198 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 SLC7A10Q9NS82 523 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-204ENST00000553324 CMTM6Q9NX76 183 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 RCE1Q9Y256 329 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
SHMT2-204ENST00000553324 M0R082 166 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 PDLIM1O00151 329 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 CD3EP07766 207 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 NUDT2P50583 147 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms