RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SHQ1Q6PI26 577 aaKnown RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 UGT2A3Q6UWM9 527 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 CREB3L2Q70SY1 520 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ANKFN1Q8N957 763 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 MNS1Q8NEH6 495 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 CLDND2Q8NHS1 167 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 MAGEE2Q8TD90 523 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF418Q8TF45 676 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 GCDHQ92947 438 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM186Q96B77 213 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 TUBGCP3Q96CW5 907 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF317Q96PQ6 595 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 SLC38A1Q9H2H9 487 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 PIF1Q9H611 641 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 HIF1ANQ9NWT6 349 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 ZDHHC2Q9UIJ5 367 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 FBXO9Q9UK97 447 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-209ENST00000553308 SPEF1Q9Y4P9 236 aa7.84□□□□□ -1.15
SYNE2-209ENST00000553308 CFAP73A6NFT4 308 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 AGAP5A6NIR3 686 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 HMGN4O00479 90 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 FAAHO00519 579 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 WNT9BO14905 357 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 SEC14L2O76054 403 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 CPSF4O95639 269 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 MSMBP08118 114 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 GKN3PP0CG01 181 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 CBR1P16152 277 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 RPS4Y1P22090 263 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PAX7P23759 505 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 MAP2K6P52564 334 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 HILS1P60008 231 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 ARF1P84077 181 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 SYPL1Q16563 259 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 ELFN2Q5R3F8 820 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 KRT80Q6KB66 452 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PEG10Q86TG7 708 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 MDP1Q86V88 176 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 EPHX4Q8IUS5 362 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 CMIPQ8IY22 773 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 IFT20Q8IY31 132 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 FAM169BQ8N8A8 192 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 OR8J2Q8NGG1 315 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 FAM216AQ8WUB2 273 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 ANP32BQ92688 251 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 NEURL3Q96EH8 262 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 APOPT1Q96IL0 206 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PPP1R36Q96LQ0 422 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 ANKRD27Q96NW4 1050 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 LRRC37BQ96QE4 947 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 SLC35A5Q9BS91 424 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 TAPBPLQ9BX59 468 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 LINC00470Q9BZP3 86 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 NOX3Q9HBY0 568 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 ASIC5Q9NY37 505 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 NOP53Q9NZM5 478 aaKnown RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 SLC17A7Q9P2U7 560 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 MARCOQ9UEW3 520 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-209ENST00000553308 PCDHB10Q9UN67 800 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 GRIP1Q9Y3R0 1128 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 TENM1Q9UKZ4 2725 aa7.83□□□□□ -1.16
SYNE2-209ENST00000553308 VSTM5A8MXK1 200 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 TMEM229AB2RXF0 380 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 TRIM77I1YAP6 450 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 HPXP02790 462 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 SAGP10523 405 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 UQCRBP14927 111 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 TCN1P20061 433 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 EPHA1P21709 976 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CXCR1P25024 350 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 COL8A2P25067 703 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CHI3L1P36222 383 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 SH3BGRP55822 239 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CLDN17P56750 224 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 EMX2Q04743 252 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 MAD2L1Q13257 205 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 DAG1Q14118 895 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 RNF130Q86XS8 419 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 KDM8Q8N371 416 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CADM2Q8N3J6 435 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 UBLCP1Q8WVY7 318 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 MRPL24Q96A35 216 aaKnown RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 TRNT1Q96Q11 434 aaKnown RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 RHOXF2Q9BQY4 288 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 RBM4Q9BWF3 364 aaKnown RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 MRPL37Q9BZE1 423 aaKnown RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 RACGAP1Q9H0H5 632 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CRLF2Q9HC73 371 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 MOV10Q9HCE1 1003 aaKnown RBP7.82□□□□□ -1.16
SYNE2-209ENST00000553308 RLIMQ9NVW2 624 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 MKS1Q9NXB0 559 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 TREM2Q9NZC2 230 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 USP22Q9UPT9 525 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 CMAHPQ9Y471 501 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms