RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 COX4I1P13073 169 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 RPS5P46782 204 aaKnown RBP16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ART1P52961 327 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 FAM69AQ5T7M9 428 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 TSPO2Q5TGU0 170 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ZNF613Q6PF04 617 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 C5orf46Q6UWT4 87 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 SPATA21Q7Z572 469 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 SLC15A3Q8IY34 581 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ZNF100Q8IYN0 542 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 SLC47A1Q96FL8 570 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 MUS81Q96NY9 551 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ALPK1Q96QP1 1244 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 TMEM43Q9BTV4 400 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ADPRHL2Q9NX46 363 aa16.98■□□□□ 0.31
PTCH1-227ENST00000553256 ELOA3DA6NLF2 546 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-227ENST00000553256 CCT8L1PA6NM43 557 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 FAM220BPB1ANY3 271 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 SNX3O60493 162 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 CCDC22O60826 627 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 ZNF432O94892 652 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 AHSA1O95433 338 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 IL32P24001 234 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 LSP1P33241 339 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 GABRA6Q16445 453 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 ELOA3BQ3SY89 546 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 MMEL1Q495T6 779 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 TIMM23BQ5SRD1 257 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 NCMAPQ5T1S8 102 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 INTS11Q5TA45 600 aaKnown RBP16.97■□□□□ 0.31
PTCH1-227ENST00000553256 WFDC8Q8IUA0 241 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 P3H2Q8IVL5 708 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 PCYOX1LQ8NBM8 494 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 ADPRHL1Q8NDY3 354 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 ELOA3Q8NG57 546 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 MCHR1Q99705 422 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 ELAC2Q9BQ52 826 aaKnown RBP16.97■□□□□ 0.31
PTCH1-227ENST00000553256 PRSS27Q9BQR3 290 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 TAPBPLQ9BX59 468 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 NPAP1Q9NZP6 1156 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 RASD1Q9Y272 281 aa16.97■□□□□ 0.31
PTCH1-227ENST00000553256 TRAV36DV7A0A075B6V5 113 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 DPRXA6NFQ7 191 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 OR5H1A6NKK0 313 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 GYS2P54840 703 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ACKR1Q16570 336 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 DEFB113Q30KQ7 82 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ENTPD8Q5MY95 495 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ADAM5Q6NVV9 412 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ERICH5Q6P6B1 374 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 HACD2Q6Y1H2 254 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 LINGO2Q7L985 606 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 KDM8Q8N371 416 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 WDR31Q8NA23 367 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 PLPPR2Q96GM1 343 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ECSITQ9BQ95 431 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 TMEM27Q9HBJ8 222 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 PARPBPQ9NWS1 579 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 GID8Q9NWU2 228 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ASB6Q9NWX5 421 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 RPS6KB2Q9UBS0 482 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 SLC25A15Q9Y619 301 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ALPK2Q86TB3 2170 aa16.96■□□□□ 0.31
PTCH1-227ENST00000553256 ACANP16112 2415 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 MS4A18H0YCH9 400 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 M0R082 166 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 CHP2O43745 196 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 OR2T1O43869 369 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 HPRP00739 348 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 DNASE1P24855 282 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 GRPRP30550 384 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 NR1H2P55055 460 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 MS4A18Q3C1V0 323 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 CASP12Q6UXS9 341 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 ZNF704Q6ZNC4 412 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-227ENST00000553256 RANBP3LQ86VV4 465 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-227ENST00000553256 P2RY8Q86VZ1 359 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 WDFY1Q8IWB7 410 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 ZNF417Q8TAU3 575 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 MOGAT1Q96PD6 335 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 ZNF587Q96SQ5 575 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-227ENST00000553256 TAS2R16Q9NYV7 291 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 B3GALT5Q9Y2C3 310 aa16.95■□□□□ 0.3
PTCH1-227ENST00000553256 NME4O00746 187 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 TRAF3IP2O43734 574 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-227ENST00000553256 GGT1P19440 569 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 KDELR2P33947 212 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 SELENOPP49908 381 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 SLC25A3Q00325 362 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 LGALS3BPQ08380 585 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 FAPQ12884 760 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 FBXW10Q5XX13 1052 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 PIGWQ7Z7B1 504 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 ADAMTS16Q8TE57 1224 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 SLC25A36Q96CQ1 311 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 PIP5K1AQ99755 562 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 SLCO5A1Q9H2Y9 848 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 ABCD2Q9UBJ2 740 aa16.94■□□□□ 0.3
PTCH1-227ENST00000553256 GMNCA6NCL1 334 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 LRRN3E7EW58 273 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms