RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 POC1BQ8TC44 478 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 CANT1Q8WVQ1 401 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
TMEM116-218ENST00000552839 UTP4Q969X6 686 aaKnown RBP10.19□□□□□ -0.78
TMEM116-218ENST00000552839 NTNG2Q96CW9 530 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 LRRC46Q96FV0 321 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 KLHDC3Q9BQ90 382 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 CHID1Q9BWS9 393 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 KLHL4Q9C0H6 718 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 IL1RAPQ9NPH3 570 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 PAQR5Q9NXK6 330 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-218ENST00000552839 RIMS3Q9UJD0 308 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 MCTS1Q9ULC4 181 aaKnown RBP10.19□□□□□ -0.78
TMEM116-218ENST00000552839 MED31Q9Y3C7 131 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 DOCK7Q96N67 2140 aa10.19□□□□□ -0.78
TMEM116-218ENST00000552839 A0A1W2PPR1 153 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 TCRBV3S1A0A5B6 114 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 B4DXG7 233 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 SULT2B1O00204 365 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 TNFRSF11BO00300 401 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 DVL2O14641 736 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 DEAF1O75398 565 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 FCGR2AP12318 317 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 PCSK6P29122 969 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 RRM2P31350 389 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 IFNGR2P38484 337 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CLK1P49759 484 aaKnown RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 LHX2P50458 406 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ARHGDIAP52565 204 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 GFRA1P56159 465 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 B3GALT5-AS1P59052 145 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ACTR3P61158 418 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CRYZQ08257 329 aaKnown RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CCNIQ14094 377 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 TAF11Q15544 211 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 NHSL2Q5HYW2 709 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 DCST1Q5T197 706 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 VASNQ6EMK4 673 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ZFP1Q6P2D0 407 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CXXC5Q7LFL8 322 aaKnown RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ATG4DQ86TL0 474 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CXorf67Q86X51 503 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 CIARTQ8N365 385 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 OR52J3Q8NH60 311 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 SPATA3Q8NHX4 192 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 SLC25A36Q96CQ1 311 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 DNAJA3Q96EY1 480 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 HS6ST2Q96MM7 605 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 TRIB1Q96RU8 372 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 TIMP4Q99727 224 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 WFDC6Q9BQY6 131 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ASPNQ9BXN1 380 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 OR11A1Q9GZK7 315 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 NDEL1Q9GZM8 345 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 BEX4Q9NWD9 120 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 NDUFAF4Q9P032 175 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ZNF629Q9UEG4 869 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 FOXD3Q9UJU5 478 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 HDGFL3Q9Y3E1 203 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 SAMHD1Q9Y3Z3 626 aaKnown RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 AP4S1Q9Y587 144 aa10.18□□□□□ -0.78
TMEM116-218ENST00000552839 NSD1Q96L73 2696 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-218ENST00000552839 ARID1AO14497 2285 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 TRAV36DV7A0A075B6V5 113 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 A0A087WUJ7 227 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 A0A1W2PNR3 127 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 CLCA1A8K7I4 914 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 ETV2O00321 342 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-218ENST00000552839 OR2T1O43869 369 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 CXCL13O43927 109 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 KRT36O76013 467 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 NTN1O95631 604 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 PLGP00747 810 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-218ENST00000552839 HIST1H2ABP04908 130 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 ZNF708P17019 499 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 IL11P20809 199 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 FASP25445 335 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 TIMP3P35625 211 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 RBM34P42696 430 aaKnown RBP10.17□□□□□ -0.78
TMEM116-218ENST00000552839 RPS5P46782 204 aaKnown RBP10.17□□□□□ -0.78
TMEM116-218ENST00000552839 CLDN15P56746 228 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 CARD18P57730 90 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 OR7A5Q15622 319 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 BCL2A1Q16548 175 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 OR2T5Q6IEZ7 315 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 HIST3H2AQ7L7L0 130 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 ADGRG3Q86Y34 549 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 KIF18BQ86Y91 864 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 OR2T29Q8NH02 315 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 OR10D3Q8NH80 312 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 PIGXQ8TBF5 258 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 STK35Q8TDR2 534 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 TMEM255BQ8WV15 326 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 TMEM239Q8WW34 195 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 PYDC1Q8WXC3 89 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 HIST1H2ACQ93077 130 aa10.17□□□□□ -0.78
TMEM116-218ENST00000552839 CPNE4Q96A23 557 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-218ENST00000552839 COX4I2Q96KJ9 171 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms