RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 SULT2B1O00204 365 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 PLPP3O14495 311 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 IMPA2O14732 288 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 IDH3BO43837 385 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 WISP2O76076 250 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 TXNDC12O95881 172 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 CH25HO95992 272 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 IGHMP01871 453 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 POU3F2P20265 443 aaPredicted RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 IGFBP5P24593 272 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 PTGER4P35408 488 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 GIPRP48546 466 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 HSPA13P48723 471 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 STARP49675 285 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 SLC16A1P53985 500 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 CRISP1P54107 249 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 CARD18P57730 90 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 RPS3AP61247 264 aaKnown RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 ADARB1P78563 741 aaKnown RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 TOMM20Q15388 145 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 H1FNTQ75WM6 255 aaPredicted RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 FGD2Q7Z6J4 655 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 PXKQ7Z7A4 578 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 OAFQ86UD1 273 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 KIF18BQ86Y91 864 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 OR5M1Q8NGP8 315 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 OSTF1Q92882 214 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 OR5B2Q96R09 309 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 PITX2Q99697 317 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 TAPBPLQ9BX59 468 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 LDAHQ9H6V9 325 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 MCCC2Q9HCC0 563 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 NRIP3Q9NQ35 241 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 TIGARQ9NQ88 270 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 KRT84Q9NSB2 600 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 NDRG4Q9ULP0 352 aaKnown RBP8.58□□□□□ -1.04
LIMA1-211ENST00000552338 BAIAP2Q9UQB8 552 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 SLC6A5Q9Y345 797 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 ZNF175Q9Y473 711 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 CDH10Q9Y6N8 788 aa8.58□□□□□ -1.04
LIMA1-211ENST00000552338 IGKV3D-15A0A087WSY6 115 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 A0A1W2PNR3 127 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 NPIPA5E9PKD4 350 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 BHLHE40O14503 412 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 CYTIPO60759 359 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 NDUFB2O95178 105 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 EDN3P14138 238 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 GABRA1P14867 456 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 GRPRP30550 384 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 GPR4P46093 362 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 NUP107P57740 925 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 C19orf57Q0VDD7 668 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 KEAP1Q14145 624 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 PTGES3Q15185 160 aaKnown RBP8.57□□□□□ -1.04
LIMA1-211ENST00000552338 SF3B4Q15427 424 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIMA1-211ENST00000552338 OR7A5Q15622 319 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 LRRC36Q1X8D7 754 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 SLC36A3Q495N2 470 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 EMC4Q5J8M3 183 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 TTC23Q5W5X9 447 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 HBMQ6B0K9 141 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 ABLIM2Q6H8Q1 611 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 POMZP3Q6PJE2 187 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 SMARCD3Q6STE5 483 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 DPY19L2P2Q6ZN68 376 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 USP51Q70EK9 711 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 FAM122BQ7Z309 247 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 LNX2Q8N448 690 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
LIMA1-211ENST00000552338 LRRC17Q8N6Y2 441 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 OR10D3Q8NH80 312 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 RNF217Q8TC41 542 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 TFAP2CQ92754 450 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 OXGR1Q96P68 337 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 SNX18Q96RF0 628 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 TNFRSF13CQ96RJ3 184 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 NAA11Q9BSU3 229 aaPredicted RBP8.57□□□□□ -1.04
LIMA1-211ENST00000552338 ASPNQ9BXN1 380 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 OR52D1Q9H346 318 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 CALHM2Q9HA72 323 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 CHST11Q9NPF2 352 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 FAM118AQ9NWS6 357 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 B3GAT1Q9P2W7 334 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 NPIPA1Q9UND3 350 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 RASD1Q9Y272 281 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 LRRC42Q9Y546 428 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 HSPE1-MOB4S4R3N1 261 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 TLN1Q9Y490 2541 aaKnown RBP8.57□□□□□ -1.04
LIMA1-211ENST00000552338 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
LIMA1-211ENST00000552338 POLEQ07864 2286 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 ATMQ13315 3056 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 A0A1B0GTH9 108 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 CD8B2A6NJW9 211 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
LIMA1-211ENST00000552338 M0R082 166 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms