RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TMEM229AB2RXF0 380 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 RPL36A-HNRNPH2H7BZ11 118 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 ALX3O95076 343 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 AKR7A3O95154 331 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 CHEK2O96017 543 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 NUDT17P0C025 328 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 LAMP1P11279 417 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 BCKDHAP12694 445 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 SELENOPP49908 381 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
CACNB3-220ENST00000551716 KCNJ10P78508 379 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 NPRL3Q12980 569 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 CEACAM7Q14002 265 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 FBLN7Q53RD9 439 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 RNF165Q6ZSG1 346 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 FRMD7Q6ZUT3 714 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 CREB3L2Q70SY1 520 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
CACNB3-220ENST00000551716 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 C22orf15Q8WYQ4 148 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-220ENST00000551716 SERHL2Q9H4I8 314 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-220ENST00000551716 ZDHHC18Q9NUE0 388 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
CACNB3-220ENST00000551716 A0A1B0GUS0 222 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TMEM72A0PK05 275 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 CLDN34H7C241 214 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 CFLARO15519 480 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 RP2O75695 350 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 C6orf47O95873 294 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 FSHBP01225 129 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
CACNB3-220ENST00000551716 MYL2P10916 166 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 UQCRBP14927 111 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 MAPK1P28482 360 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TACR3P29371 465 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
CACNB3-220ENST00000551716 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TEKQ02763 1124 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 BAMBIQ13145 260 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
CACNB3-220ENST00000551716 ATAD3BQ5T9A4 648 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 OR7A2PQ8NGA2 310 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 TAPBPLQ9BX59 468 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 NELFAQ9H3P2 528 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
CACNB3-220ENST00000551716 CENPVL1A0A0U1RR11 272 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 DNAJC9-AS1A6NH13 148 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 LYPLA1O75608 230 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-220ENST00000551716 UPK3AO75631 287 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 ZNF432O94892 652 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 RAD52P43351 418 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 ALDH3B1P43353 468 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 SEC24CP53992 1094 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 C2orf54Q08AI8 447 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 OR7A5Q15622 319 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 MAPK14Q16539 360 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 GSTA3Q16772 222 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 PCGF3Q3KNV8 242 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 GKAP1Q5VSY0 366 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-220ENST00000551716 LINGO2Q7L985 606 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 C6orf120Q7Z4R8 191 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 MDP1Q86V88 176 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 MYPOPQ86VE0 399 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-220ENST00000551716 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 ACMSDQ8TDX5 336 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 COQ8BQ96D53 544 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 PKP2Q99959 881 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 MMP27Q9H306 513 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
CACNB3-220ENST00000551716 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 MMP24Q9Y5R2 645 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
CACNB3-220ENST00000551716 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 PPIAL4CA0A0B4J2A2 164 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 PPIAL4DF5H284 164 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 FAAHO00519 579 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 LSM1O15116 133 aaKnown RBP13.08□□□□□ -0.32
CACNB3-220ENST00000551716 SCN2BO60939 215 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-220ENST00000551716 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 CXCR1P25024 350 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 CAPZA2P47755 286 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 SELENOVP59797 346 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 DNAJB13P59910 316 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 GALK2Q01415 458 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 MVKQ03426 396 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 LIPMQ5VYY2 423 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 ZYG11AQ6WRX3 759 aa13.08□□□□□ -0.32
CACNB3-220ENST00000551716 OR2T11Q8NH01 316 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms