RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 IL1RL2Q9HB29 575 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 EQTNQ9NQ60 294 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 ABCD2Q9UBJ2 740 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 TEKT2Q9UIF3 430 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 YARS2Q9Y2Z4 477 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 PCDHGB3Q9Y5G1 929 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 HERC2O95714 4834 aa5.8□□□□□ -1.48
DEPDC4-210ENST00000551642 ROS1P08922 2347 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 OR6C70A6NIJ9 312 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 A8MUI8 341 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 A8MVJ9 347 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 H3BUI4 141 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TLX2O43763 284 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CD5LO43866 347 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TSPAN2O60636 221 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 NME6O75414 186 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 OR2J2O76002 312 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 AK1P00568 194 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 HNRNPCP07910 306 aaKnown RBP eCLIP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ETFAP13804 333 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 NDUFB7P17568 137 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ABCD3P28288 659 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 LCN1P31025 176 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 GABRA3P34903 492 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CRATP43155 626 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CPA2P48052 419 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 GZMMP51124 257 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 NR0B1P51843 470 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF134P52741 427 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 PNLIPRP2P54317 469 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 PSMD4P55036 377 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 NR1H2P55055 460 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MTPNP58546 118 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 DSTNP60981 165 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 PSME3P61289 254 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 SSBP2P81877 361 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MRPS22P82650 360 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 RBBP4Q09028 425 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TNK1Q13470 666 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MEP1AQ16819 746 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ARHGAP11BQ3KRB8 267 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MIDNQ504T8 468 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ACER2Q5QJU3 275 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ATAD3BQ5T9A4 648 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ANGPTL8Q6UXH0 198 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 RINLQ6ZS11 566 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CALHM3Q86XJ0 350 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC44A2Q8IWA5 706 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 GPALPP1Q8IXQ4 340 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC15A3Q8IY34 581 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TAGAPQ8N103 731 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ARHGAP24Q8N264 748 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 GHDCQ8N2G8 530 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 C10orf111Q8N326 155 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 RBM15BQ8NDT2 890 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 OR5D16Q8NGK9 328 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC22A8Q8TCC7 542 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 PNPT1Q8TCS8 783 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 GPR151Q8TDV0 419 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 FAM222BQ8WU58 562 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CDS1Q92903 461 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 C1GALT1C1Q96EU7 318 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MOGAT1Q96PD6 335 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 RASL10BQ96S79 203 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 ECSITQ9BQ95 431 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 THUMPD3Q9BV44 507 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 PTDSS2Q9BVG9 487 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 CDCP1Q9H5V8 836 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TRIM45Q9H8W5 580 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 Q9N2J8 555 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 A4GALTQ9NPC4 353 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 SPAG4Q9NPE6 437 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 POLE3Q9NRF9 147 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 EXD2Q9NVH0 621 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TAS2R1Q9NYW7 299 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 TMEM181Q9P2C4 612 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 MRTO4Q9UKD2 239 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 LIPT1Q9Y234 373 aa5.79□□□□□ -1.48
DEPDC4-210ENST00000551642 OR5H15A6NDH6 313 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 FAM220BPB1ANY3 271 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 WWP2O00308 870 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 NME4O00746 187 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 GYG2O15488 501 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF354AO60765 605 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 STX11O75558 287 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 KCNK2O95069 426 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 HRGP04196 525 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TFPTP0C1Z6 253 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OR12D1P0DN82 309 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 HSD17B1P14061 328 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TMED10P49755 219 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 HLCSP50747 726 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SSR4P51571 173 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC7A2P52569 658 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 CASP9P55211 416 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 EEFSECP57772 596 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 FUT5Q11128 374 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 VEZF1Q14119 521 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SELPLGQ14242 412 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms