RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SPAG6O75602 509 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 FLOT1O75955 427 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 NPIPA8P0DM63 369 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 PRG2P13727 222 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 GCFC2P16383 781 aaKnown RBP3.62□□□□□ -1.83
LIMA1-205ENST00000550592 UQCRC2P22695 453 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 DHPSP49366 369 aaPredicted RBP3.62□□□□□ -1.83
LIMA1-205ENST00000550592 STARP49675 285 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 CBX1P83916 185 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 RAB40BQ12829 278 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 PRR4Q16378 134 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 SLC5A12Q1EHB4 618 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 KRTAP21-3Q3LHN1 58 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 ATAD3BQ5T9A4 648 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 METTL11BQ5VVY1 283 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 KIAA1328Q86T90 577 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 CLDN19Q8N6F1 224 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 LINC00612Q8N6U2 182 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 OR13F1Q8NGS4 319 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 RPL3LQ92901 407 aaKnown RBP3.62□□□□□ -1.83
LIMA1-205ENST00000550592 TTC25Q96NG3 672 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 OR5B2Q96R09 309 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 CRACR2AQ9BSW2 395 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 CAB39LQ9H9S4 337 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 ELOVL3Q9HB03 270 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 AIPL1Q9NZN9 384 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 RIMS3Q9UJD0 308 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF221Q9UK13 617 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 NPIPA1Q9UND3 350 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 MAB21L2Q9Y586 359 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 MMP24Q9Y5R2 645 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 NBEAQ8NFP9 2946 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 ATG2AQ2TAZ0 1938 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 MYH2Q9UKX2 1941 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 PCNX2A6NKB5 2137 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 IGLV8-61A0A075B6I0 122 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 B4DXG7 233 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 H3BMQ9 156 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 K7EQM0 130 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 OR7A17O14581 309 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 H2BFMP0C1H6 154 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF806P0C7X5 589 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 SERPINA2P20848 420 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ZP3P21754 424 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 PRPHP41219 470 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 EFNA3P52797 238 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ARFIP1P53367 373 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 AP3M2P53677 418 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 OTUD4Q01804 1114 aaKnown RBP3.61□□□□□ -1.83
LIMA1-205ENST00000550592 GGTA1PQ4G0N0 100 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 SBK1Q52WX2 424 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 CADM2Q8N3J6 435 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF525Q8N782 197 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 FAM133AQ8N9E0 248 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 SYT14Q8NB59 555 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 VN1R2Q8NFZ6 395 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 OR10A7Q8NGE5 316 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ACER1Q8TDN7 264 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 PSMG2Q969U7 264 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 C7orf34Q96L11 122 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 C12orf66Q96MD2 445 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF607Q96SK3 696 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 RIT2Q99578 217 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ZSCAN5AQ9BUG6 496 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 C19orf24Q9BVV8 132 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 ABCD2Q9UBJ2 740 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 RNF14Q9UBS8 474 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 APOBEC3BQ9UH17 382 aaKnown RBP3.61□□□□□ -1.83
LIMA1-205ENST00000550592 MRPS33Q9Y291 106 aaKnown RBP3.61□□□□□ -1.83
LIMA1-205ENST00000550592 TICRRQ7Z2Z1 1910 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 APC2O95996 2303 aa3.61□□□□□ -1.83
LIMA1-205ENST00000550592 TANC1Q9C0D5 1861 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 DMXL2Q8TDJ6 3036 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 AHCTF1Q8WYP5 2266 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 DLG5Q8TDM6 1919 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 MCM3APO60318 1980 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 UBR5O95071 2799 aaPredicted RBP3.6□□□□□ -1.83
LIMA1-205ENST00000550592 PP2D1A8MPX8 630 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 GMFGO60234 142 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 GPX5O75715 221 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 RHOBTB1O94844 696 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 UGT2B4P06133 528 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 ADORA2BP29275 332 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 RPL29P47914 159 aaKnown RBP3.6□□□□□ -1.83
LIMA1-205ENST00000550592 RIPK4P57078 832 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 SPIBQ01892 262 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 MXD4Q14582 209 aaPredicted RBP3.6□□□□□ -1.83
LIMA1-205ENST00000550592 CFAP157Q5JU67 520 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 SPATA46Q5T0L3 261 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 TTC23Q5W5X9 447 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 OR5M10Q6IEU7 315 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 ACOT1Q86TX2 421 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 VASH2Q86V25 355 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF683Q8IZ20 524 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 CD177Q8N6Q3 437 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 ANKFN1Q8N957 763 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 STEAP2Q8NFT2 490 aa3.6□□□□□ -1.83
LIMA1-205ENST00000550592 OR52M1Q8NGK5 317 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms