RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SELENOPP49908 381 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 HOXC5Q00444 222 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 NRF1Q16656 503 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 LINGO2Q7L985 606 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 MUC15Q8N387 334 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 GOLGA6L1Q8N7Z2 621 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 MFSD8Q8NHS3 518 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 HS6ST2Q96MM7 605 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 CCDC28BQ9BUN5 200 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 CACNG6Q9BXT2 260 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 RAD21L1Q9H4I0 556 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 IKZF5Q9H5V7 419 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 BARX1Q9HBU1 254 aaPredicted RBP11.75□□□□□ -0.53
GCN1-206ENST00000549815 VAPAQ9P0L0 249 aa11.75□□□□□ -0.53
GCN1-206ENST00000549815 CHD3Q12873 2000 aaKnown RBP11.74□□□□□ -0.53
GCN1-206ENST00000549815 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 TMEM247A6NEH6 219 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 SSX4O60224 188 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 PNMTP11086 282 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 ETS2P15036 469 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 HTR2AP28223 471 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 FABP6P51161 128 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 STX1BP61266 288 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 PPP2R2BQ00005 443 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 TGFBR3Q03167 851 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 LGALS3BPQ08380 585 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 HIKESHIQ53FT3 197 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 TMEM225Q6GV28 225 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 LSMEM1Q8N8F7 131 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 OR10H5Q8NGA6 315 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 LRRC8CQ8TDW0 803 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 SPDL1Q96EA4 605 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 KTI12Q96EK9 354 aaPredicted RBP11.74□□□□□ -0.53
GCN1-206ENST00000549815 NELFAQ9H3P2 528 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 ARMC7Q9H6L4 198 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 C12orf10Q9HB07 376 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 CCDC167Q9P0B6 97 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 B3GAT1Q9P2W7 334 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 POU2F3Q9UKI9 436 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 RASD1Q9Y272 281 aa11.74□□□□□ -0.53
GCN1-206ENST00000549815 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 IGHV4-30-2A0A087WSY4 118 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 H7C417 338 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 CRLF1O75462 422 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 UPK3AO75631 287 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 ZNF432O94892 652 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 AHSA1O95433 338 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 LGI1O95970 557 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 RPS5P46782 204 aaKnown RBP11.73□□□□□ -0.53
GCN1-206ENST00000549815 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
GCN1-206ENST00000549815 ATP4BP51164 291 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 PRPS1P60891 318 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 DMTNQ08495 405 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 GCNT6Q5T4J0 391 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 ARFGEF3Q5TH69 2177 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 DHRS4L2Q6PKH6 230 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 DEPDC4Q8N2C3 294 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 KDM8Q8N371 416 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 NFKBIDQ8NI38 313 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 LINC00470Q9BZP3 86 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 CACYBPQ9HB71 228 aaKnown RBP11.73□□□□□ -0.53
GCN1-206ENST00000549815 OBP2BQ9NPH6 170 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 TMEM45AQ9NWC5 275 aa11.73□□□□□ -0.53
GCN1-206ENST00000549815 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 ARPC4-TTLL3A0A0A6YYG9 625 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 IGHV1-18A0A0C4DH31 117 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 A0A1B0GWA3 101 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 C5orf58C9J3I9 102 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 ATP6V1G2-DDX39BF2Z307 99 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 NR5A2O00482 541 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 CD5LO43866 347 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 TPST1O60507 370 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 WNT11O96014 354 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 GPX2P18283 190 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 APOBEC3AP31941 199 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 AQP5P55064 265 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 CDK6Q00534 326 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 ADRM1Q16186 407 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 MST1LQ2TV78 715 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 GLIPR1L2Q4G1C9 344 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 NIPAL3Q6P499 406 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 MAGEE2Q8TD90 523 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 HTRA1Q92743 480 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 TAAR8Q969N4 342 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 SLC25A36Q96CQ1 311 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 ALKBH3Q96Q83 286 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms