RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 DOCK7Q96N67 2140 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 EPG5Q9HCE0 2579 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 C2orf92A0A1B0GVN3 265 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TCP11X1B4DZS4 312 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 H3BMH7 237 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 AZIN1O14977 448 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TOX3O15405 576 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 SLC28A2O43868 658 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 EEDO75530 441 aaKnown RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 F8A1P23610 371 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 EPHA2P29317 976 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 B3GALT5-AS1P59052 145 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TRA2BP62995 288 aaKnown RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 DMTNQ08495 405 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 IFT88Q13099 833 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 PAGE2BQ5JRK9 111 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ELFN2Q5R3F8 820 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 HIST2H2AA3Q6FI13 130 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ADGRG3Q86Y34 549 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 KMT5CQ86Y97 462 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 OR2T11Q8NH01 316 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 CLHC1Q8NHS4 586 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 CCDC126Q96EE4 140 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 MARK4Q96L34 752 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 SLC25A33Q9BSK2 321 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 URM1Q9BTM9 101 aaKnown RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 C1orf50Q9BV19 199 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 VN1R1Q9GZP7 353 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 EGLN1Q9GZT9 426 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 Q9H8V8 135 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 PALMDQ9NP74 551 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TXLNGQ9NUQ3 528 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ANGPTL2Q9UKU9 493 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TMCO1Q9UM00 188 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 KLK4Q9Y5K2 254 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 DNAJC15Q9Y5T4 150 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 C9JVG2 144 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 PLOD2O00469 737 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 PLPP1O14494 284 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 BIRC5O15392 142 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 FZD7O75084 574 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ALOX12BO75342 701 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 DIRAS3O95661 229 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 FSHBP01225 129 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 SLC35G6P0C7Q6 338 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 CDK4P11802 303 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 FGF5P12034 268 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 SSR2P43308 183 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 RAP1GDS1P52306 607 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 RGS1Q08116 209 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 ZNF155Q12901 538 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 CLPPQ16740 277 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 VWA2Q5GFL6 755 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 GFRALQ6UXV0 394 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 CEACAM20Q6UY09 585 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TTC29Q8NA56 475 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 FAM76AQ8TAV0 307 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TWIST2Q8WVJ9 160 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 NXPE2Q96DL1 559 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 MS4A6EQ96DS6 147 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 NTMT1Q9BV86 223 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 MS4A8Q9BY19 250 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 WDR55Q9H6Y2 383 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 MED4Q9NPJ6 270 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 LHX9Q9NQ69 397 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 FBXO8Q9NRD0 319 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 ZCCHC3Q9NUD5 404 aaKnown RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 TMED7Q9Y3B3 224 aa3.36□□□□□ -1.87
APAF1-208ENST00000549007 POLR3HQ9Y535 204 aaPredicted RBP3.36□□□□□ -1.87
APAF1-208ENST00000549007 ZZEF1O43149 2961 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 A0A0G2JPF8 293 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LOC101059948A0A1B0GTJ6 334 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 LRIT2A6NDA9 550 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 HNRNPCL3B7ZW38 293 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TMX2-CTNND1H3BSU7 103 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RAD1O60671 282 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 B4GALT2O60909 372 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PEX11AO75192 247 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 KLK1P06870 262 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 HNRNPCL4P0DMR1 293 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PRKAR1AP10644 381 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 EFNA1P20827 205 aaPredicted RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 CXCR2P25025 360 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 RASSF2P50749 326 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 HNRNPFP52597 415 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 EFNA3P52797 238 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 PKNOX1P55347 436 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 HTD2P86397 168 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 ASPHQ12797 758 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NPTX1Q15818 432 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 NKAIN1Q4KMZ8 207 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
APAF1-208ENST00000549007 KHDRBS2Q5VWX1 349 aaKnown RBP3.35□□□□□ -1.87
APAF1-208ENST00000549007 LIPJQ5W064 366 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms