RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NGFRP08138 427 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 OR2T7P0C7T2 308 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF888P0CJ79 500 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-228ENST00000548938 GABRA1P14867 456 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 FHL1Q13642 323 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 RPE65Q16518 533 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 B3GNTL1Q67FW5 361 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-228ENST00000548938 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 C12orf76Q8N812 135 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-228ENST00000548938 OR2T27Q8NH04 317 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 OR1S1Q8NH92 325 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 WFIKKN2Q8TEU8 576 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 MBNL1Q9NR56 388 aaKnown RBP12.61□□□□□ -0.39
HDAC7-228ENST00000548938 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 ACSL5Q9ULC5 683 aa12.61□□□□□ -0.39
HDAC7-228ENST00000548938 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
HDAC7-228ENST00000548938 SNRPGP15A8MWD9 76 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 IMPA2O14732 288 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SELENOFO60613 162 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 DNAJB6O75190 326 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF35P13682 527 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 CTAG1AP78358 180 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 GPM6BQ13491 265 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 CBFBQ13951 182 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 RGP1Q92546 391 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF559Q9BR84 538 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 UTP23Q9BRU9 249 aaKnown RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 IL21RQ9HBE5 538 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 EXOSC3Q9NQT5 275 aaKnown RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 ICAM5Q9UMF0 924 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 HRH3Q9Y5N1 445 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SIGLEC5O15389 551 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 PRICKLE3O43900 615 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 IL5P05113 134 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 TMIGD3P0DMS9 266 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 PPP3CBP16298 524 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 GRPRP30550 384 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SLC6A6P31641 620 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 ADH7P40394 386 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SIGLEC14Q08ET2 396 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 GK2Q14410 553 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 OR7E24Q6IFN5 339 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 GSG1LQ6UXU4 331 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 EID2Q8N6I1 236 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
HDAC7-228ENST00000548938 PTCHD1Q96NR3 888 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 FLRT3Q9NZU0 649 aa12.6□□□□□ -0.39
HDAC7-228ENST00000548938 SCN2AQ99250 2005 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 DOCK9Q9BZ29 2069 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 TRPM6Q9BX84 2022 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 TSFMP43897 325 aaKnown RBP12.59□□□□□ -0.39
HDAC7-228ENST00000548938 NANOS3P60323 173 aaKnown RBP12.59□□□□□ -0.39
HDAC7-228ENST00000548938 TNFRSF17Q02223 184 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 STX4Q12846 297 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 VN1R4Q7Z5H5 301 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ZAR1Q86SH2 424 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 COX18Q8N8Q8 333 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 DNAAF1Q8NEP3 725 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ZCCHC10Q8TBK6 192 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 PNPLA2Q96AD5 504 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-228ENST00000548938 GLS2Q9UI32 602 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ADAM18Q9Y3Q7 739 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 V9GY05 133 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ACOT7O00154 380 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ADAM11O75078 769 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 CALCRP30988 508 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 DLX5P56178 289 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 TAS2R20P59543 309 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 EIF2B5Q13144 721 aaKnown RBP12.59□□□□□ -0.39
HDAC7-228ENST00000548938 IL10RAQ13651 578 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 ZNF234Q14588 700 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 DCAF12L2Q5VW00 463 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 POMGNT2Q8NAT1 580 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 OR4K14Q8NGD5 310 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 IFT46Q9NQC8 304 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 CHRNA9Q9UGM1 479 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
HDAC7-228ENST00000548938 USP34Q70CQ2 3546 aa12.58□□□□□ -0.39
HDAC7-228ENST00000548938 DNAH14Q0VDD8 3507 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 PRR32B1ATL7 298 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GNB5O14775 395 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZFPL1O95159 310 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 IGF2P01344 180 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GLULP15104 373 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 MECP2P51608 486 aaKnown RBP12.58□□□□□ -0.4
HDAC7-228ENST00000548938 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms