RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GABRG3Q99928 467 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 MESP1Q9BRJ9 268 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 ALG12Q9BV10 488 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 DPAGT1Q9H3H5 408 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 PPIEQ9UNP9 301 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 DCTN6O00399 190 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 SCDO00767 359 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 KCNJ13O60928 360 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MTNR1BP49286 362 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 SNTA1Q13424 505 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF764Q96H86 408 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 TIMP4Q99727 224 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 DPCDQ9BVM2 203 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MRPL39Q9NYK5 338 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 NCDNQ9UBB6 729 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 GRHPRQ9UBQ7 328 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 PCDHGB7Q9Y5F8 929 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 IGHV5-51A0A0C4DH38 117 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 PROS1P07225 676 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 CDKN2AP42771 156 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 CSNK1EP49674 416 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 FZD2Q14332 565 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 FGD2Q7Z6J4 655 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM151BQ8IW70 566 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 NR4A3Q92570 626 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 NSMAFQ92636 917 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MRPS18AQ9NVS2 196 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 LTBP2Q14767 1821 aa12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 MN1Q10571 1320 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-209ENST00000548825 SERINC4A6NH21 518 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 HRGP04196 525 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 SPI1P17947 270 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 MGAT2Q10469 447 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TOMM34Q15785 309 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 NDUFA5Q16718 116 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 FHL5Q5TD97 284 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 CD200R1LQ6Q8B3 271 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 RNF113BQ8IZP6 322 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 GIMAP1Q8WWP7 306 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 MCOLN1Q9GZU1 580 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 LYRM4Q9HD34 91 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 FREM3P0C091 2139 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 A0A1W2PQ72 361 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 PRAMEF26H0Y7S4 382 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 H0YC42 278 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TCRBP04435 133 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 WNT1P04628 370 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ANKRD34CP0C6C1 535 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 GDNFP39905 211 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 NSDHLQ15738 373 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 CCDC58Q4VC31 144 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TMPRSS11FQ6ZWK6 438 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 MARCH3Q86UD3 253 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 WDR76Q9H967 626 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 LIN7BQ9HAP6 207 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC23A1Q9UHI7 598 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ANXA2P2A6NMY6 339 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM150CB9EJG8 249 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ARL6IP5O75915 188 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ZFPL1O95159 310 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 UCHL1P09936 223 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 PRKCAP17252 672 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 STOMP27105 288 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TACR3P29371 465 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 RABIFP47224 123 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 VEGFCP49767 419 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 MEP1BQ16820 701 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 BICRALQ6AI39 1079 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF613Q6PF04 617 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 CMTM4Q8IZR5 234 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 OR51A4Q8NGJ6 313 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 SEC22CQ9BRL7 303 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 CYSLTR2Q9NS75 346 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF69Q9UC07 566 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 ITGB1BP2Q9UKP3 347 aa12.5□□□□□ -0.41
PRPF40B-209ENST00000548825 A6NCN8 305 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms