RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PLA2G2FQ9BZM2 168 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 IKZF5Q9H5V7 419 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 FARSBQ9NSD9 589 aaKnown RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 DPM3Q9P2X0 92 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 CRLS1Q9UJA2 301 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SAMD4AQ9UPU9 718 aaKnown RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PARP14Q460N5 1801 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 ZFHX2Q9C0A1 2572 aaPredicted RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 MYBPHLA2RUH7 354 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 GSAPA4D1B5 854 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ARHGEF35A5YM69 484 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SAGE2PA6NJ88 616 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SPECC1L-ADORA2AF8WAN1 911 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 K7ENP7 123 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 XPO1O14980 1071 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 STX7O15400 261 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ZSCAN12O43309 604 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 OR1F1O43749 312 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SLC37A4O43826 429 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SLITRK3O94933 977 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 LYPLA2O95372 231 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 CD55P08174 381 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 CLUP10909 449 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TDGF1P13385 188 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 RPS2P15880 293 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 HNRNPA2B1P22626 353 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 GLRA2P23416 452 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 PAX7P23759 505 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ARL2P36404 184 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 MDH2P40926 338 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 NAMPTP43490 491 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 BDKRB1P46663 353 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TAF6P49848 677 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 HNMTP50135 292 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 MEOX2P50222 304 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SLC25A1P53007 311 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 LIM2P55344 173 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 HMGN5P82970 282 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 BDH1Q02338 343 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SRSF5Q13243 272 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 KCNJ11Q14654 390 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 PON2Q15165 354 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SF3A2Q15428 464 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TIGITQ495A1 244 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TEX44Q53QW1 395 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ATF7IP2Q5U623 682 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 VITQ6UXI7 678 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 LRRC70Q7Z2Q7 622 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 DPY19L4Q7Z388 723 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TMEM17Q86X19 198 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 LINC00612Q8N6U2 182 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SPRYD4Q8WW59 207 aaPredicted RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 THRSPQ92748 146 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SIGLEC12Q96PQ1 595 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 CITED1Q99966 193 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 GSDMCQ9BYG8 508 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ELOVL4Q9GZR5 314 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 RMND5AQ9H871 391 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 TMEM9BQ9NQ34 198 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 PNO1Q9NRX1 252 aaKnown RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 WRAP73Q9P2S5 460 aaPredicted RBP3.04□□□□□ -1.92
PTCH1-216ENST00000548379 Q9UF83 564 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ASB3Q9Y575 518 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 MMP24Q9Y5R2 645 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SIP14410 1827 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 ABCA7Q8IZY2 2146 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 AGRNO00468 2067 aa3.04□□□□□ -1.92
PTCH1-216ENST00000548379 SMIM28A0A1B0GU29 152 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 CCDC169A6NNP5 214 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 I3L4J1 428 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 NEMFO60524 1076 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 PGCP20142 388 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 CSRP1P21291 193 aaKnown RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 ATP5A1P25705 553 aaKnown RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 IFNAR2P48551 515 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 TUFMP49411 452 aaKnown RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 VLDLRP98155 873 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 RGS1Q08116 209 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 RIPPLY1Q0D2K3 151 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 SELPLGQ14242 412 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF239Q16600 458 aaKnown RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 TATDN3Q17R31 274 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 GLYR1Q49A26 553 aaPredicted RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 SLC22A10Q63ZE4 541 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 Q6ZS52 159 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 RGS9BPQ6ZS82 235 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 P2RY8Q86VZ1 359 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 LINC01561Q8N1V8 128 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 FBXL16Q8N461 479 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 C15orf54Q8N8G6 183 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 TSTD1Q8NFU3 115 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 RHOXF1Q8NHV9 184 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 KIFAP3Q92845 792 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 MYLPFQ96A32 169 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 TCEAL4Q96EI5 215 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 VSIG2Q96IQ7 327 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 ERP44Q9BS26 406 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 ALG12Q9BV10 488 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 DUSP16Q9BY84 665 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms