RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 EFHD2Q96C19 240 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ASB9Q96DX5 294 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ECSITQ9BQ95 431 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF416Q9BWM5 594 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 TM9SF3Q9HD45 589 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 CCL28Q9NRJ3 127 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 OR10H1Q9Y4A9 318 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 COLCA2A8K830 154 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 PEX7O00628 323 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 SS18L1O75177 396 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 IDH1O75874 414 aaKnown RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 MBD3O95983 291 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 KLK3P07288 261 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 CISD3P0C7P0 127 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 TSPY4P0CV99 314 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 TSPY10P0CW01 314 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 POLR2EP19388 210 aaKnown RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 CELP19835 753 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 ATP6V1B2P21281 511 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 FMO3P31513 532 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 VDAC2P45880 294 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 P2RY1P47900 373 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 EFNB2P52799 333 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 Q6ZR03 302 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 KIAA1328Q86T90 577 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 ZNF573Q86YE8 665 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 CCDC50Q8IVM0 306 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 ATP6V0D2Q8N8Y2 350 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 OR1N2Q8NGR9 330 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 OR10T2Q8NGX3 314 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 OR9G1Q8NH87 305 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 NPAS2Q99743 824 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 TMEM246Q9BRR3 403 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 RIOK1Q9BRS2 568 aaKnown RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 RIOK2Q9BVS4 552 aaKnown RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 SIAEQ9HAT2 523 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 TAS2R3Q9NYW6 316 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 MARCOQ9UEW3 520 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-204ENST00000546816 GNPTGQ9UJJ9 305 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 RPH3ALQ9UNE2 315 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 TRAF3IP3Q9Y228 551 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 SLC25A15Q9Y619 301 aa1.96□□□□□ -2.1
CCDC38-204ENST00000546816 IGLV2-18A0A075B6J9 118 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 IQANK1A0A1B0GTG1 560 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 C12orf71A8MTZ7 269 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 BCAS1O75363 584 aaPredicted RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 STAMBPO95630 424 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 AK1P00568 194 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 KRT8P05787 483 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 OMGP23515 440 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 IL12AP29459 219 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 MDH1P40925 334 aaKnown RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 PKNOX1P55347 436 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 RPS14P62263 151 aaKnown RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 HTD2P86397 168 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 PJVKQ0ZLH3 352 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 GANABQ14697 944 aaKnown RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 CYTH1Q15438 398 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 RFX4Q33E94 735 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 CHRFAM7AQ494W8 412 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 ABCA11PQ4W5N1 156 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 SLC25A34Q6PIV7 304 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 HSDL2Q6YN16 418 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 HMGN2P46Q86SG4 172 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 PAQR7Q86WK9 346 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 ARRDC1Q8N5I2 433 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 CATSPER1Q8NEC5 780 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 OR4K14Q8NGD5 310 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 DTX3LQ8TDB6 740 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 ACOT11Q8WXI4 607 aaPredicted RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 FRZBQ92765 325 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 C4orf36Q96KX1 117 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 POPDC2Q9HBU9 364 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 SLC17A5Q9NRA2 495 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 FARSBQ9NSD9 589 aaKnown RBP1.95□□□□□ -2.1
CCDC38-204ENST00000546816 QPCTLQ9NXS2 382 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 CLCF1Q9UBD9 225 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 TRAPPC4Q9Y296 219 aa1.95□□□□□ -2.1
CCDC38-204ENST00000546816 A0A0G2JLM5 398 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 A0A1B0GWJ7 208 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 A8MUI8 341 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 MBTPS2O43462 519 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 PFKFB2O60825 505 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 RBBP9O75884 186 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 NEBLO76041 1014 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 AP2A1O95782 977 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 NPR2P20594 1047 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 HNF1AP20823 631 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 GYG1P46976 350 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 BPIFB3P59826 476 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 ACTA2P62736 377 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 ACTC1P68032 377 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 NUCB2P80303 420 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 KIAA0087Q14695 138 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 SLC15A2Q16348 729 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 TP53I3Q53FA7 332 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 COA6Q5JTJ3 125 aaKnown RBP1.94□□□□□ -2.1
CCDC38-204ENST00000546816 C1orf220Q5T0J3 134 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 MARCH8Q5T0T0 291 aa1.94□□□□□ -2.1
CCDC38-204ENST00000546816 RIPPLY2Q5TAB7 128 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms