RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GMEB1Q9Y692 573 aa8.22□□□□□ -1.09
YBX3-218ENST00000546298 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
YBX3-218ENST00000546298 ABCA2Q9BZC7 2435 aa8.22□□□□□ -1.09
YBX3-218ENST00000546298 NAV3Q8IVL0 2385 aa8.21□□□□□ -1.09
YBX3-218ENST00000546298 TACC2O95359 2948 aa8.21□□□□□ -1.09
YBX3-218ENST00000546298 HMGB1P1B2RPK0 211 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 TMEM229AB2RXF0 380 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 E7EQL1 145 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 RNF223E7ERA6 249 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 ZNF587BE7ETH6 402 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 AKAP8O43823 692 aaKnown RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 CD8AP01732 235 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 IGHV4-39P01824 125 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 ARAFP10398 606 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 PNMTP11086 282 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 ZNF43P17038 809 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 GPX2P18283 190 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 CDH2P19022 906 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 SLC6A2P23975 617 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 PCSK6P29122 969 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 ACVR1BP36896 505 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 DSCR9P59020 149 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 UBE2NP61088 152 aaKnown RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 NCALDP61601 193 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 C1DQ13901 141 aaKnown RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 SQLEQ14534 574 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 MFSD13AQ14CX5 517 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 RAB35Q15286 201 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 AGKQ53H12 422 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 HMBOX1Q6NT76 420 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 C6orf89Q6UWU4 347 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 CREB3L2Q70SY1 520 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 HDXQ7Z353 690 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 FUNDC1Q8IVP5 155 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 MUC15Q8N387 334 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 NFKBIDQ8NI38 313 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 STON2Q8WXE9 905 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 SLC38A4Q969I6 547 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 ZNF317Q96PQ6 595 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 KCNS3Q9BQ31 491 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 EBF4Q9BQW3 602 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 TMEM27Q9HBJ8 222 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 INTS9Q9NV88 658 aaKnown RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 ARGLU1Q9NWB6 273 aaPredicted RBP8.21□□□□□ -1.1
YBX3-218ENST00000546298 SLC25A37Q9NYZ2 338 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 RCE1Q9Y256 329 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 ANGPT4Q9Y264 503 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 ATP23Q9Y6H3 246 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 PMF1-BGLAPU3KQ54 211 aa8.21□□□□□ -1.1
YBX3-218ENST00000546298 AIM2O14862 343 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 SSX4O60224 188 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 VIMP08670 466 aaKnown RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 HOXB9P17482 250 aaPredicted RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 APOBEC3AP31941 199 aaPredicted RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 RPS5P46782 204 aaKnown RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 P2RY4P51582 365 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 NUDT6P53370 316 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 SH3BGRP55822 239 aaPredicted RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 RGS8P57771 180 aaPredicted RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 HOXC5Q00444 222 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 SCARB2Q14108 478 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 TBRG1Q3YBR2 411 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 PAGE3Q5JUK9 113 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 FAM69AQ5T7M9 428 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 NIPAL3Q6P499 406 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 EPHX4Q8IUS5 362 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 MSRB3Q8IXL7 192 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 HIPK4Q8NE63 616 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 OR6S1Q8NH40 331 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 TSPEARQ8WU66 669 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 SLC47A1Q96FL8 570 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 OXGR1Q96P68 337 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 EPYCQ99645 322 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 CACNG6Q9BXT2 260 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 LINC00470Q9BZP3 86 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 TMEM38AQ9H6F2 299 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 VAPAQ9P0L0 249 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 TESQ9UGI8 421 aaKnown RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 LEF1Q9UJU2 399 aaPredicted RBP8.2□□□□□ -1.1
YBX3-218ENST00000546298 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 CSPG4Q6UVK1 2322 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 DSCAMO60469 2012 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 CSMD2Q7Z408 3487 aa8.2□□□□□ -1.1
YBX3-218ENST00000546298 HIVEP2P31629 2446 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 TRAV36DV7A0A075B6V5 113 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 A0A1B0GWA3 101 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 VSTM5A8MXK1 200 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 INAFM1C9JVW0 142 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 FTCDNL1E5RQL4 147 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 H7C417 338 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 ANGPT2O15123 496 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 SLC43A1O75387 559 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 LGI1O95970 557 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms