RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 CDC123O75794 336 aaPredicted RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 RBBP9O75884 186 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 RPA2P15927 270 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 SIGLEC14Q08ET2 396 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 DCAF12L2Q5VW00 463 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 ZNF613Q6PF04 617 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 OR14A16Q8NHC5 309 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 OTUB2Q96DC9 234 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 C14orf105Q9NVL8 296 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 SERTAD3Q9UJW9 196 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 ETV7Q9Y603 341 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 MDC1Q14676 2089 aaKnown RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 GXYLT2A0PJZ3 443 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 CTNSO60931 367 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 UBBP0CG47 229 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 UBCP0CG48 685 aaKnown RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
SRP54-202ENST00000546080 MPGP29372 298 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 RPS27AP62979 156 aaKnown RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 SORDQ00796 357 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 PON3Q15166 354 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 OR2L3Q8NG85 312 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 OR4C16Q8NGL9 310 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 SLC7A5P2Q9GIP4 190 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 ADAP2Q9NPF8 381 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 IDSB3KWA1 339 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 PSMD9O00233 223 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 LATO43561 262 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 GLSO94925 669 aaPredicted RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 CISD3P0C7P0 127 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 ITPKBP27987 946 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MC2RQ01718 297 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 TNFRSF17Q02223 184 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MPPED2Q15777 294 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 PAQR7Q86WK9 346 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 TMEM17Q86X19 198 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 DOK4Q8TEW6 326 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 HSPA12BQ96MM6 686 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 LRFN5Q96NI6 719 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 NKX6-2Q9C056 277 aaPredicted RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 CHRNA9Q9UGM1 479 aa13.03□□□□□ -0.32
SRP54-202ENST00000546080 MRTO4Q9UKD2 239 aaKnown RBP13.03□□□□□ -0.32
SRP54-202ENST00000546080 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
SRP54-202ENST00000546080 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.33
SRP54-202ENST00000546080 ADH7P40394 386 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 DHCR24Q15392 516 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 LILRA6Q6PI73 481 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 C12orf40Q86WS4 652 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
SRP54-202ENST00000546080 SAMD14Q8IZD0 417 aaPredicted RBP13.02□□□□□ -0.33
SRP54-202ENST00000546080 KCT2Q8NC54 265 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 OR6K6Q8NGW6 343 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.33
SRP54-202ENST00000546080 NXPE3Q969Y0 559 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 IER3IP1Q9Y5U9 82 aa13.02□□□□□ -0.33
SRP54-202ENST00000546080 A0A0B4J2E0 115 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 EDDM13A0A1B0GTR0 161 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 A0A1B0GX12 115 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 MOSPD3O75425 235 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 ZFPL1O95159 310 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 CSF1P09603 554 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
SRP54-202ENST00000546080 DIO1P49895 249 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 NANOS3P60323 173 aaKnown RBP13.01□□□□□ -0.33
SRP54-202ENST00000546080 LTBQ06643 244 aa13.01□□□□□ -0.33
SRP54-202ENST00000546080 ELAVL3Q14576 367 aaKnown RBP13.01□□□□□ -0.33
SRP54-202ENST00000546080 HNRNPA1L2Q32P51 320 aaKnown RBP13.01□□□□□ -0.33
SRP54-202ENST00000546080 TRMT12Q53H54 448 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms