RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SEPHS2Q99611 448 aa18.23■□□□□ 0.51
HMGA2-211ENST00000545998 PIGMQ9H3S5 423 aa18.23■□□□□ 0.51
HMGA2-211ENST00000545998 MAGIXQ9H6Y5 334 aa18.23■□□□□ 0.51
HMGA2-211ENST00000545998 KCNJ16Q9NPI9 418 aa18.23■□□□□ 0.51
HMGA2-211ENST00000545998 AQP12BA6NM10 295 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 ZNF724A8MTY0 619 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 LRRN3E7EW58 273 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 KPNA4O00629 521 aaPredicted RBP18.22■□□□□ 0.51
HMGA2-211ENST00000545998 CGAP01215 116 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 MT-ND1P03886 318 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 FABP3P05413 133 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 GRPRP30550 384 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 TFF3Q07654 80 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 FLOT2Q14254 428 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 SLC17A1Q14916 467 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 MFSD13AQ14CX5 517 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 PIWIL3Q7Z3Z3 882 aaKnown RBP18.22■□□□□ 0.51
HMGA2-211ENST00000545998 ZDHHC21Q8IVQ6 265 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 AQP12AQ8IXF9 295 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 OR6K3Q8NGY3 331 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 PFN4Q8NHR9 129 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 PIP5K1AQ99755 562 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 TACO1Q9BSH4 297 aaKnown RBP18.22■□□□□ 0.51
HMGA2-211ENST00000545998 ANKRD19PQ9H560 264 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 SEC14L4Q9UDX3 406 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 KLF2Q9Y5W3 355 aaPredicted RBP18.22■□□□□ 0.51
HMGA2-211ENST00000545998 ASH1LQ9NR48 2969 aaKnown RBP18.22■□□□□ 0.51
HMGA2-211ENST00000545998 CENPEQ02224 2701 aa18.22■□□□□ 0.51
HMGA2-211ENST00000545998 A0A1W2PRQ8 180 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 A1L4Q6 167 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 M0R082 166 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 MT-ATP6P00846 226 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 IGF2P01344 180 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 CBLP22681 906 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 GTF2E2P29084 291 aaKnown RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 MAGEA2P43356 314 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 DGCR6Q14129 220 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 ZNF74Q16587 644 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 TMEM201Q5SNT2 666 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 ZNF417Q8TAU3 575 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 DHRS1Q96LJ7 313 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 ZNF587Q96SQ5 575 aaPredicted RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 KLHL4Q9C0H6 718 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 CORINQ9Y5Q5 1042 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 ENO4A6NNW6 628 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 EEF1E1-BLOC1S5C9J1V9 151 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 EEF1E1O43324 174 aaKnown RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 CH25HO95992 272 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 H1F0P07305 194 aaKnown RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 CD8BP10966 210 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 H1FNTQ75WM6 255 aaPredicted RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 NUFIP2Q7Z417 695 aaKnown RBP18.21■□□□□ 0.51
HMGA2-211ENST00000545998 C10orf53Q8N6V4 93 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 ADPRHL1Q8NDY3 354 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 CHST11Q9NPF2 352 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 PLSCR4Q9NRQ2 329 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 C20orf141Q9NUB4 165 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 EMC3Q9P0I2 261 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 B3GALT5Q9Y2C3 310 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 MED31Q9Y3C7 131 aa18.21■□□□□ 0.51
HMGA2-211ENST00000545998 VAMP5O95183 116 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ASCL1P50553 236 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 LSM11P83369 360 aaKnown RBP eCLIP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 FBXL19-AS1Q494R0 122 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 FAM98BQ52LJ0 330 aaKnown RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 TMEM225Q6GV28 225 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 MAMDC2Q7Z304 686 aaPredicted RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 SLC46A3Q7Z3Q1 461 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ADGRG5Q8IZF4 528 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 SCAIQ8N9R8 606 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 SLC7A13Q8TCU3 470 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ACOT11Q8WXI4 607 aaPredicted RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF775Q96BV0 537 aaPredicted RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF347Q96SE7 839 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 SF3B5Q9BWJ5 86 aaKnown RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 ASPNQ9BXN1 380 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 FKRPQ9H9S5 495 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 MRPL39Q9NYK5 338 aaKnown RBP18.2■□□□□ 0.5
HMGA2-211ENST00000545998 PROCRQ9UNN8 238 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 RASD1Q9Y272 281 aa18.2■□□□□ 0.5
HMGA2-211ENST00000545998 A0A087WUU8 490 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 GPR171O14626 319 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 MSTNO14793 375 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 PIP5K1CO60331 668 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 SMNDC1O75940 238 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGA2-211ENST00000545998 CHRNB3Q05901 458 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 LUZP2Q86TE4 346 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 GPAT4Q86UL3 456 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 RNF113BQ8IZP6 322 aaKnown RBP18.19■□□□□ 0.5
HMGA2-211ENST00000545998 OR9K2Q8NGE7 335 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 UTP4Q969X6 686 aaKnown RBP18.19■□□□□ 0.5
HMGA2-211ENST00000545998 FUZQ9BT04 418 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 OPN3Q9H1Y3 402 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-211ENST00000545998 NANSQ9NR45 359 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 C6orf203Q9P0P8 240 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF229Q9UJW7 825 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 TESMINQ9Y4I5 508 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 FLVCR1Q9Y5Y0 555 aa18.19■□□□□ 0.5
HMGA2-211ENST00000545998 ALPK2Q86TB3 2170 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 ANKHD1Q8IWZ3 2542 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms