RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 F5P12259 2224 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 A0A087WUJ7 227 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 PSMD9O00233 223 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 GPRIN2O60269 458 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 KLF8O95600 359 aaPredicted RBP13.98□□□□□ -0.17
CNN3-207ENST00000545882 ERVK-25P63136 954 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 COL28A1Q2UY09 1125 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 Q6ZTK2 550 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 ZNF550Q7Z398 422 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 OR52I2Q8NH67 350 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 SIPA1Q96FS4 1042 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 HSPA12BQ96MM6 686 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 ACTR6Q9GZN1 396 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 FBRSQ9HAH7 460 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 MKKSQ9NPJ1 570 aaPredicted RBP13.98□□□□□ -0.17
CNN3-207ENST00000545882 NANSQ9NR45 359 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 HRASLS2Q9NWW9 162 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 LRIT1Q9P2V4 623 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 RCE1Q9Y256 329 aa13.98□□□□□ -0.17
CNN3-207ENST00000545882 DNAH14Q0VDD8 3507 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 IFITM5A6NNB3 132 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 ZNF879B4DU55 563 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 KHNYNO15037 678 aaKnown RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 ARPC3O15145 178 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 SHOXO15266 292 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 OR10H2O60403 315 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 EGFP01133 1207 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 DNASE1P24855 282 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 SSTR2P30874 369 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 RPL4P36578 427 aaKnown RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 GPR143P51810 404 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 LGALS3BPQ08380 585 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 TOR2AQ5JU69 321 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 SLC35D3Q5M8T2 416 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 FCRLAQ7L513 359 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 LINGO2Q7L985 606 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 NLRC3Q7RTR2 1065 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 ZNF761Q86XN6 746 aaPredicted RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 SERPINA12Q8IW75 414 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 OR8H3Q8N146 312 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 PHYHIPQ92561 330 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 GAS2L1Q99501 681 aaPredicted RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 DPCDQ9BVM2 203 aaPredicted RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 GPR174Q9BXC1 333 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 TCEAL2Q9H3H9 227 aaPredicted RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 NKIRAS2Q9NYR9 191 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 CPNE7Q9UBL6 633 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 RPS6KB2Q9UBS0 482 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 SCP2D1Q9UJQ7 156 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 ZNF346Q9UL40 294 aaKnown RBP13.97□□□□□ -0.17
CNN3-207ENST00000545882 SZT2Q5T011 3432 aa13.97□□□□□ -0.17
CNN3-207ENST00000545882 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 FAM171A2A8MVW0 826 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 AIPO00170 330 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 SSNA1O43805 119 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 PEX14O75381 377 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 ZFPL1O95159 310 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 GRPRP30550 384 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 PTH2RP49190 550 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 CLDN12P56749 244 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 RPS4XP62701 263 aaKnown RBP13.96□□□□□ -0.17
CNN3-207ENST00000545882 UBE2IP63279 158 aaKnown RBP13.96□□□□□ -0.17
CNN3-207ENST00000545882 DEFB110Q30KQ9 67 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 GPR139Q6DWJ6 353 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 MOSPD2Q8NHP6 518 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 TMEM131Q92545 1883 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
CNN3-207ENST00000545882 MAP6Q96JE9 813 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 ZNF436Q9C0F3 470 aaPredicted RBP13.96□□□□□ -0.17
CNN3-207ENST00000545882 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 ZNF281Q9Y2X9 895 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 CLDN16Q9Y5I7 305 aa13.96□□□□□ -0.17
CNN3-207ENST00000545882 IGKV1D-42A0A075B6H8 117 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 GABARAPH6UMI1 98 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 OR7A10O76100 309 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 GLCEO94923 617 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 CT45A8P0DMV1 189 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 CT45A9P0DMV2 189 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 HNRNPA2B1P22626 353 aaKnown RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 CDKN2AP42771 156 aaKnown RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 AP2S1P53680 142 aaPredicted RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 RPS15P62841 145 aaKnown RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 POU4F3Q15319 338 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 ZNHIT3Q15649 155 aaPredicted RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 NNATQ16517 81 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 ISXQ2M1V0 245 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 CT45A2Q5DJT8 189 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 FAM69AQ5T7M9 428 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 EXD3Q8N9H8 876 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 OR6K6Q8NGW6 343 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 OR4C3Q8NH37 302 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 RIT1Q92963 219 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 MARVELD3Q96A59 401 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 DACT3Q96B18 629 aaPredicted RBP13.96□□□□□ -0.18
CNN3-207ENST00000545882 C3orf49Q96BT1 292 aa13.96□□□□□ -0.18
CNN3-207ENST00000545882 TSPAN10Q9H1Z9 355 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms