RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CACYBPQ9HB71 228 aaKnown RBP12.32□□□□□ -0.44
DDX11-228ENST00000545115 SLC6A13Q9NSD5 602 aa12.32□□□□□ -0.44
DDX11-228ENST00000545115 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX11-228ENST00000545115 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
DDX11-228ENST00000545115 HEATR1Q9H583 2144 aaKnown RBP12.32□□□□□ -0.44
DDX11-228ENST00000545115 NDUFS8O00217 210 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 NPIPB7O75200 414 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 LGI1O95970 557 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 CRYAAP02489 173 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 GZMKP49863 264 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 SELENOPP49908 381 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 DSTNP60981 165 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 MST1LQ2TV78 715 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 RPS26P11Q5JNZ5 115 aaPredicted RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 HHATQ5VTY9 493 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 NIPAL3Q6P499 406 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 CREB3L2Q70SY1 520 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 SLC38A5Q8WUX1 472 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 C3orf49Q96BT1 292 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 RMND5AQ9H871 391 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 TPT1P8Q9HAU6 139 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 MYOZ1Q9NP98 299 aaPredicted RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 CA10Q9NS85 328 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 THUMPD1Q9NXG2 353 aaKnown RBP12.31□□□□□ -0.44
DDX11-228ENST00000545115 RASD1Q9Y272 281 aa12.31□□□□□ -0.44
DDX11-228ENST00000545115 MXRA5Q9NR99 2828 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 TMEM247A6NEH6 219 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 VWC2LB2RUY7 222 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 TMEM229AB2RXF0 380 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 SLCO1B7G3V0H7 640 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 LMX1BO60663 402 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 SLC22A3O75751 556 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 PDE5AO76074 875 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 AHSA1O95433 338 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 TFPTP0C1Z6 253 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 KITP10721 976 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 PRG2P13727 222 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 SERPINF1P36955 418 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 GGTLC2Q14390 218 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 NXNQ6DKJ4 435 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 MSANTD1Q6ZTZ1 278 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 SLC46A3Q7Z3Q1 461 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 CLIP4Q8N3C7 705 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 MAGEE2Q8TD90 523 aaPredicted RBP12.3□□□□□ -0.44
DDX11-228ENST00000545115 STK35Q8TDR2 534 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 TMEM19Q96HH6 336 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 MAELQ96JY0 434 aaKnown RBP12.3□□□□□ -0.44
DDX11-228ENST00000545115 SPATA9Q9BWV2 254 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 LINC00470Q9BZP3 86 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 MOV10Q9HCE1 1003 aaKnown RBP12.3□□□□□ -0.44
DDX11-228ENST00000545115 CRNNQ9UBG3 495 aaPredicted RBP12.3□□□□□ -0.44
DDX11-228ENST00000545115 ZNF232Q9UNY5 417 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 IFT52Q9Y366 437 aa12.3□□□□□ -0.44
DDX11-228ENST00000545115 ARFGEF3Q5TH69 2177 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 B9A039 149 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 SNNO75324 88 aaPredicted RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 UPK3AO75631 287 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 IGFBP5P24593 272 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 NR4A2P43354 598 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 NAAAQ02083 359 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 GTDC1Q4AE62 458 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 FAM166AQ6J272 317 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 LINGO2Q7L985 606 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 SERPINA11Q86U17 422 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 BCL2L2Q92843 193 aaPredicted RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 VPS33AQ96AX1 596 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 ITCHQ96J02 903 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
DDX11-228ENST00000545115 ZIM2Q9NZV7 527 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 CHST2Q9Y4C5 530 aa12.29□□□□□ -0.44
DDX11-228ENST00000545115 A0A096LPE4 126 aa12.28□□□□□ -0.44
DDX11-228ENST00000545115 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
DDX11-228ENST00000545115 LOC390937A0A1W2PQ73 354 aa12.28□□□□□ -0.44
DDX11-228ENST00000545115 TMEM120BA0PK00 339 aa12.28□□□□□ -0.44
DDX11-228ENST00000545115 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms