RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ZNF311Q5JNZ3 666 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 AVPI1Q5T686 147 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 TYW3Q6IPR3 259 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 NIPAL3Q6P499 406 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 TIFABQ6ZNK6 161 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 GPAT4Q86UL3 456 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 MDP1Q86V88 176 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 OR4M2Q8NGB6 313 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 SFXN5Q8TD22 340 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 CNOT9Q92600 299 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 DDIT4LQ96D03 193 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 ZNF837Q96EG3 531 aaPredicted RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 ZNF317Q96PQ6 595 aaPredicted RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 PKP2Q99959 881 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 NTN4Q9HB63 628 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 CRLF2Q9HC73 371 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 FZR1Q9UM11 496 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 SLC35A3Q9Y2D2 325 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 J3QLI3 93 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 PIP5K1BO14986 540 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 SEC14L2O76054 403 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 LINC00032P0C843 101 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 NAT2P11245 290 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 HOXB1P14653 301 aaPredicted RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 ANPEPP15144 967 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 MDKP21741 143 aaPredicted RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 MATN1P21941 496 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 FPR2P25090 351 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 SOAT1P35610 550 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 ARR3P36575 388 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 HPCAL1P37235 193 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 POLR2HP52434 150 aaKnown RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 ETF1P62495 437 aaKnown RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 HBA1P69905 142 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 IL13RA1P78552 427 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 ROR2Q01974 943 aaKnown RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 MVKQ03426 396 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 FUT5Q11128 374 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 PTGR1Q14914 329 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 OR7A5Q15622 319 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 DCAF12L2Q5VW00 463 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 ZYG11AQ6WRX3 759 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 FRRS1Q6ZNA5 592 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 CREB3L2Q70SY1 520 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 DOK3Q7L591 496 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 EPHX4Q8IUS5 362 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 KRTCAP2Q8N6L1 136 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 PMM1Q92871 262 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 ZNF48Q96MX3 618 aaPredicted RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 SLITRK2Q9H156 845 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 MS4A5Q9H3V2 200 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 PIF1Q9H611 641 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 EXOSC3Q9NQT5 275 aaKnown RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 PDP1Q9P0J1 537 aaPredicted RBP8.03□□□□□ -1.12
CHD4-212ENST00000545083 FIS1Q9Y3D6 152 aa8.03□□□□□ -1.12
CHD4-212ENST00000545083 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 H3BQF6 201 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 AZIN1O14977 448 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 CDC14BO60729 498 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 AK1P00568 194 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 IGHV2-5P01817 119 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 GPIP06744 558 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 OR12D1P0DN82 309 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 NEFHP12036 1026 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 MAGEB1P43366 347 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 HTR3AP46098 478 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 SH3BGRP55822 239 aaPredicted RBP8.02□□□□□ -1.13
CHD4-212ENST00000545083 KCNJ10P78508 379 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 MRPS11P82912 194 aaKnown RBP8.02□□□□□ -1.13
CHD4-212ENST00000545083 TMEM225Q6GV28 225 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 LEG1Q6P5S2 330 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 C6orf120Q7Z4R8 191 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 LCA5Q86VQ0 697 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
CHD4-212ENST00000545083 ARFGAP2Q8N6H7 521 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 KIF18AQ8NI77 898 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 RAB8BQ92930 207 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 MOAP1Q96BY2 351 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 COQ8BQ96D53 544 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 ZNF416Q9BWM5 594 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 LINC00470Q9BZP3 86 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 OR51I1Q9H343 314 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 MOV10Q9HCE1 1003 aaKnown RBP8.02□□□□□ -1.13
CHD4-212ENST00000545083 OXSMQ9NWU1 459 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 ADPRHL2Q9NX46 363 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 ZNF69Q9UC07 566 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 TMED5Q9Y3A6 229 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 WDR45Q9Y484 360 aa8.02□□□□□ -1.13
CHD4-212ENST00000545083 DUXAA6NLW8 204 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 RPL36A-HNRNPH2H7BZ11 118 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CFLARO15519 480 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 SCN2BO60939 215 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 HLA-HP01893 362 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 PROCP04070 461 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
CHD4-212ENST00000545083 MYL2P10916 166 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms