RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ASPNQ9BXN1 380 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 FN3KQ9H479 309 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 CCNB1IP1Q9NPC3 277 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 FKBP14Q9NWM8 211 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 MRPL39Q9NYK5 338 aaKnown RBP27.43■■□□□ 1.98
CCM2-219ENST00000544363 AKAP13Q12802 2813 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 OR2M5A3KFT3 312 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 ARPC3O15145 178 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 IMPDH2P12268 514 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 ANKK1Q8NFD2 765 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 C5orf34Q96MH7 638 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 KATNB1Q9BVA0 655 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.42■■□□□ 1.981e-8■■■■□ 21.4
CCM2-219ENST00000544363 TMEM185BQ9H7F4 350 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 TAS2R5Q9NYW4 299 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 ERVK-18Q9QC07 812 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 SEC14L4Q9UDX3 406 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 SSUH2Q9Y2M2 353 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 SLC6A5Q9Y345 797 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 CORINQ9Y5Q5 1042 aa27.42■■□□□ 1.98
CCM2-219ENST00000544363 KDM4EB2RXH2 506 aaPredicted RBP27.41■■□□□ 1.98
CCM2-219ENST00000544363 IDH3BO43837 385 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 CEACAM4O75871 244 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 CD14P08571 375 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 OR7A5Q15622 319 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 ZNF362Q5T0B9 420 aaPredicted RBP27.41■■□□□ 1.98
CCM2-219ENST00000544363 IGFL2Q6UWQ7 119 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 AHSA2Q719I0 299 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 TAPBPLQ9BX59 468 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 ADAM18Q9Y3Q7 739 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 LIPT2A6NK58 231 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 RIIAD1A6NNX1 92 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 M0R082 166 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 CTXN1P60606 82 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 ERVK-25P63136 954 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 MYBPHQ13203 477 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 PMS2P3Q13401 168 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 ZNF417Q8TAU3 575 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 ZNF587Q96SQ5 575 aaPredicted RBP27.41■■□□□ 1.98
CCM2-219ENST00000544363 COPS4Q9BT78 406 aa27.41■■□□□ 1.98
CCM2-219ENST00000544363 HINT3Q9NQE9 182 aaKnown RBP27.41■■□□□ 1.98
CCM2-219ENST00000544363 RPL36Q9Y3U8 105 aaKnown RBP27.41■■□□□ 1.98
CCM2-219ENST00000544363 PRODHO43272 600 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 MRPS14O60783 128 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 FZD7O75084 574 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 IFNGP01579 166 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 APEHP13798 732 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 GDF1P27539 372 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 SLC15A1P46059 708 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 RPL5P46777 297 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 NR1H2P55055 460 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 TMEM176BQ3YBM2 270 aaPredicted RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 AADACL4Q5VUY2 407 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 CXXC5Q7LFL8 322 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 GALNTL5Q7Z4T8 443 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 YRDCQ86U90 279 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 SCAIQ8N9R8 606 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 FAM83FQ8NEG4 500 aaPredicted RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 OR14L1PQ8NHC6 308 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 SLC39A7Q92504 469 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 OR2B2Q9GZK3 357 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 CNOT2Q9NZN8 540 aaKnown RBP27.4■■□□□ 1.98
CCM2-219ENST00000544363 KLHL21Q9UJP4 597 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 HDGFL3Q9Y3E1 203 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 SNX5Q9Y5X3 404 aa27.4■■□□□ 1.98
CCM2-219ENST00000544363 EFCAB10A6NFE3 127 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 SNTNA6NMZ2 147 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 PLPP3O14495 311 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 RGS10O43665 173 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 OPN1LWP04000 364 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 F13BP05160 661 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 ADORA3P0DMS8 318 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 ZNF3P17036 446 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 GTF2E2P29084 291 aaKnown RBP27.39■■□□□ 1.98
CCM2-219ENST00000544363 SHC1P29353 583 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 B3GALT5-AS1P59052 145 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 CPOQ8IVL8 374 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 SPARTQ8N0X7 666 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 MYDGFQ969H8 173 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 SCMH1Q96GD3 660 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 OR5B2Q96R09 309 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 CCDC90BQ9GZT6 254 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 ALKBH4Q9NXW9 302 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 B4GALT7Q9UBV7 327 aa27.39■■□□□ 1.98
CCM2-219ENST00000544363 CELSR3Q9NYQ7 3312 aa27.39■■□□□ 1.97
CCM2-219ENST00000544363 KLRC4-KLRK1H3BQV0 150 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 HIST1H1CP16403 213 aaKnown RBP27.38■■□□□ 1.97
CCM2-219ENST00000544363 SFTPDP35247 375 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 ZNF91Q05481 1191 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 NXNL2Q5VZ03 156 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 FAM122BQ7Z309 247 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 SIGLEC11Q96RL6 698 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 DKK4Q9UBT3 224 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 ASPMQ8IZT6 3477 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 DPPA5A6NC42 116 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 IMPA2O14732 288 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 TRAPPC6AO75865 159 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 OR6A2O95222 327 aa27.38■■□□□ 1.97
CCM2-219ENST00000544363 DBTP11182 482 aaKnown RBP27.38■■□□□ 1.97
CCM2-219ENST00000544363 PIPP12273 146 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms