RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GPLD1P80108 840 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 GPR150Q8NGU9 434 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.118e-7■□□□□ 9.6
CHD4-210ENST00000544040 PKMYT1Q99640 499 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 PHF1O43189 567 aaPredicted RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 PTHP01270 115 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 SLC5A2P31639 672 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 P2RX3P56373 397 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CLDN17P56750 224 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 IRF4Q15306 451 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.115e-10■■■■■ 31.7
CHD4-210ENST00000544040 UTP4Q969X6 686 aaKnown RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 OR52A5Q9H2C5 316 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CYB5BO43169 146 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 TRAF3IP2O43734 574 aaPredicted RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 SUSD5O60279 629 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 HTR2CP28335 458 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CCR7P32248 378 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 SRP9P49458 86 aaKnown RBP14.38□□□□□ -0.11
CHD4-210ENST00000544040 CTSCP53634 463 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 CTSL3PQ5NE16 218 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 LRP10Q7Z4F1 713 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 SIAH3Q8IW03 269 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 GAB3Q8WWW8 586 aa14.38□□□□□ -0.11
CHD4-210ENST00000544040 RNF212BA8MTL3 300 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 XRCC3O43542 346 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ARL16Q0P5N6 197 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 LRRTM3Q86VH5 581 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 BATF2Q8N1L9 274 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 STT3BQ8TCJ2 826 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 MYH10P35580 1976 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 NUDT1P36639 197 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 HTR3AP46098 478 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ESCO2Q56NI9 601 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ZNF684Q5T5D7 378 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 SLC16A14Q7RTX9 510 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ASB17Q8WXJ9 295 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ST8SIA2Q92186 375 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 C7orf72A4D263 438 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 MYADML2A6NDP7 307 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 PDE7AQ13946 482 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 HSD17B11Q8NBQ5 300 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 OR10R2Q8NGX6 335 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 RBPMSQ93062 196 aaKnown RBP14.37□□□□□ -0.11
CHD4-210ENST00000544040 TMEM59Q9BXS4 323 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 ULBP3Q9BZM4 244 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 MRPS28Q9Y2Q9 187 aaKnown RBP14.37□□□□□ -0.11
CHD4-210ENST00000544040 CSO75390 466 aaKnown RBP14.37□□□□□ -0.11
CHD4-210ENST00000544040 HNF1AP20823 631 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 BLVRBP30043 206 aaPredicted RBP14.37□□□□□ -0.11
CHD4-210ENST00000544040 RUNX2Q13950 521 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 NPSR1Q6W5P4 371 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 OVCH1Q7RTY7 1134 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 KATNB1Q9BVA0 655 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 C20orf85Q9H1P6 137 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 POFUT1Q9H488 388 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 TEX51A0A1B0GUA7 166 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 MAKP20794 623 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 CNR1P21554 472 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 PRPH2P23942 346 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 APEX1P27695 318 aaKnown RBP14.37□□□□□ -0.11
CHD4-210ENST00000544040 ZNF33BQ06732 778 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 MZT1Q08AG7 82 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 GPR176Q14439 515 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 SLC5A12Q1EHB4 618 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 SFXN4Q6P4A7 337 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 TMEM200AQ86VY9 491 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 GHSRQ92847 366 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 RTP4Q96DX8 246 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 REEP6Q96HR9 211 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 HCFC1R1Q9NWW0 138 aa14.37□□□□□ -0.11
CHD4-210ENST00000544040 P2RY10O00398 339 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 SLC31A2O15432 143 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 IQCF3P0C7M6 154 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 TRHRP34981 398 aaPredicted RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 POLR2IP36954 125 aaKnown RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 SNCAP37840 140 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 ARHGAP11BQ3KRB8 267 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 SOHLH1Q5JUK2 328 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 LURAP1Q96LR2 239 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 C11orf54Q9H0W9 315 aaPredicted RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 NRIP3Q9NQ35 241 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 A0A087WZY1 265 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 MCRIP1C9JLW8 97 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 ICMTO60725 284 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 PSMB1P20618 241 aaKnown RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 KIAA1024LP59773 190 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 MARCH8Q5T0T0 291 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 SYT9Q86SS6 491 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 LINC00346Q8IVM7 164 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 RNF141Q8WVD5 230 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 FAM3CQ92520 227 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 IL17CQ9P0M4 197 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 TCHHQ07283 1943 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 MYH8P13535 1937 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 KRBOX1C9JBD0 128 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms