RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PMS2P3Q13401 168 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 PON3Q15166 354 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 ZNF239Q16600 458 aaKnown RBP20.68■□□□□ 0.9
HOMER3-205ENST00000542541 PPP4R4Q6NUP7 873 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 ADGRE4PQ86SQ3 457 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 OAFQ86UD1 273 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 HS3ST5Q8IZT8 346 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 LRRC17Q8N6Y2 441 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 ATG16L2Q8NAA4 619 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 GALNT11Q8NCW6 608 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 OR5J2Q8NH18 312 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 UCN2Q96RP3 112 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 TRIB1Q96RU8 372 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 C9orf16Q9BUW7 83 aa20.68■□□□□ 0.9
HOMER3-205ENST00000542541 SLC22A20A6NK97 555 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 M0R082 166 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 KLF4O43474 513 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 C1QL1O75973 258 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 OR6A2O95222 327 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 SLC34A1Q06495 639 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 COX10Q12887 443 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 OTUD3Q5T2D3 398 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-205ENST00000542541 GTF2IRD2BQ6EKJ0 949 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 TMEM225Q6GV28 225 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 NANOGNBQ7Z5D8 188 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 GTF2IRD2Q86UP8 949 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 DOLPP1Q86YN1 238 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 SLC43A2Q8N370 569 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 ADPRHL1Q8NDY3 354 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 ZNF417Q8TAU3 575 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 DNAJC9Q8WXX5 260 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 EME1Q96AY2 570 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 ZNF587Q96SQ5 575 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-205ENST00000542541 CHST11Q9NPF2 352 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 KIF17Q9P2E2 1029 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 MAGED1Q9Y5V3 778 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-205ENST00000542541 UNC119BA6NIH7 251 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 CD8B2A6NJW9 211 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 AQP7P3A6NL99 342 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 VAMP5O95183 116 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 POU2F1P14859 743 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 GSSP48637 474 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 ACSF3Q4G176 576 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-205ENST00000542541 NSUN5P2Q63ZY6 315 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 FCRLAQ7L513 359 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 ATCAYQ86WG3 371 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 MEX3DQ86XN8 651 aaKnown RBP20.67■□□□□ 0.9
HOMER3-205ENST00000542541 TMEM99Q8N816 258 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 CIB1Q99828 191 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 GABARAPL1Q9H0R8 117 aa20.67■□□□□ 0.9
HOMER3-205ENST00000542541 CDC42EP2O14613 210 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 TRIP10Q15642 601 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 ZBED5Q49AG3 693 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 C1orf185Q5T7R7 199 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 P4HA3Q7Z4N8 544 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 FNDC9Q8TBE3 224 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 ROBO4Q8WZ75 1007 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 WNT2BQ93097 391 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 GTPBP3Q969Y2 492 aaKnown RBP20.66■□□□□ 0.9
HOMER3-205ENST00000542541 CLCF1Q9UBD9 225 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 RASD1Q9Y272 281 aa20.66■□□□□ 0.9
HOMER3-205ENST00000542541 BLOC1S5-TXNDC5H3BN57 136 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 SMAD9O15198 467 aaKnown RBP20.65■□□□□ 0.9
HOMER3-205ENST00000542541 FAHD1Q6P587 224 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 CD300LDQ6UXZ3 194 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 OR51A7Q8NH64 312 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 GPA33Q99795 319 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 RBM4BQ9BQ04 359 aaKnown RBP20.65■□□□□ 0.9
HOMER3-205ENST00000542541 RBM4Q9BWF3 364 aaKnown RBP20.65■□□□□ 0.9
HOMER3-205ENST00000542541 UCK2Q9BZX2 261 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 NDEL1Q9GZM8 345 aa20.65■□□□□ 0.9
HOMER3-205ENST00000542541 NKX1-2Q9UD57 310 aaPredicted RBP20.65■□□□□ 0.9
HOMER3-205ENST00000542541 IGHV3-15A0A0B4J1V0 119 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 PLPP3O14495 311 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 ATP6V1G2O95670 118 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 ADORA3P0DMS8 318 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 PRPS1P60891 318 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 GTF3C1Q12789 2109 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 RNPS1Q15287 305 aaKnown RBP20.64■□□□□ 0.9
HOMER3-205ENST00000542541 RPTNQ6XPR3 784 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 B3GNT6Q6ZMB0 384 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 ZBTB49Q6ZSB9 765 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 MCEMP1Q8IX19 187 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 OR13C2Q8NGS9 318 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 TNFRSF13CQ96RJ3 184 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 TM9SF2Q99805 663 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 NIPSNAP1Q9BPW8 284 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 SF3B5Q9BWJ5 86 aaKnown RBP20.64■□□□□ 0.9
HOMER3-205ENST00000542541 SIGLEC7Q9Y286 467 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 HIF3AQ9Y2N7 669 aa20.64■□□□□ 0.9
HOMER3-205ENST00000542541 MPDZO75970 2070 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 SHANK1Q9Y566 2161 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 PDLIM1O00151 329 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 CYTIPO60759 359 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 PTP4A3O75365 173 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 RCBTB2O95199 551 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 RPS4XP62701 263 aaKnown RBP20.64■□□□□ 0.89
HOMER3-205ENST00000542541 PUDPQ08623 228 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 ZP4Q12836 540 aa20.64■□□□□ 0.89
HOMER3-205ENST00000542541 EPHX4Q8IUS5 362 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms