RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 VDAC3Q9Y277 283 aa8.34□□□□□ -1.07
LDHA-220ENST00000542179 PCNX3Q9H6A9 2034 aa8.34□□□□□ -1.07
LDHA-220ENST00000542179 TRAV27A0A087WT01 109 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 LRRC3CA6NJW4 275 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 POM121CA8CG34 1229 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 LRRN3E7EW58 273 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 IMPA2O14732 288 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 ARPC3O15145 178 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 KLK10O43240 276 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 IDH3BO43837 385 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 NME2P1O60361 137 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 HIST1H2ABP04908 130 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SP1P08047 785 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 HK1P19367 917 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SPINK2P20155 84 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 NME2P22392 152 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 FMO3P31513 532 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 UQCRC1P31930 480 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 RPS5P46782 204 aaKnown RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 DNASE1L1P49184 302 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SLC35A2P78381 396 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SELENBP1Q13228 472 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SGCBQ16585 318 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 HYAL4Q2M3T9 481 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 ZNF362Q5T0B9 420 aaPredicted RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 C1QL3Q5VWW1 255 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SLC25A25Q6KCM7 469 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 POMZP3Q6PJE2 187 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 HIST3H2AQ7L7L0 130 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 C10orf53Q8N6V4 93 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 TCEANCQ8N8B7 351 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SCAIQ8N9R8 606 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 LRRC75AQ8NAA5 344 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 BPIFB6Q8NFQ5 453 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 HIST1H2ACQ93077 130 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 SCMH1Q96GD3 660 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 NPAS1Q99742 590 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 IFT27Q9BW83 186 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 NDEL1Q9GZM8 345 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 FN3KQ9H479 309 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 CCNB1IP1Q9NPC3 277 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 FANCFQ9NPI8 374 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 NRIP3Q9NQ35 241 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 FKBP14Q9NWM8 211 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 MRPL39Q9NYK5 338 aaKnown RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 PLA2G3Q9NZ20 509 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 AASSQ9UDR5 926 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 PSORS1C1Q9UIG5 152 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
LDHA-220ENST00000542179 SLC6A5Q9Y345 797 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 CORINQ9Y5Q5 1042 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 KCNMB2Q9Y691 235 aa8.33□□□□□ -1.08
LDHA-220ENST00000542179 EML6Q6ZMW3 1958 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 A0A1W2PPB8 328 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 A6NL46 340 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 SNTNA6NMZ2 147 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 CLCA1A8K7I4 914 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 KIR3DP1A8MWS1 328 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 KDM4EB2RXH2 506 aaPredicted RBP8.32□□□□□ -1.08
LDHA-220ENST00000542179 G3V3Y1 287 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 LINC01387J3KSC0 135 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 M0R3G1 203 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 XPNPEP2O43895 674 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 FAM20BO75063 409 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
LDHA-220ENST00000542179 CLPTM1O96005 669 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 IL11P20809 199 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 IDUAP35475 653 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 SLC15A1P46059 708 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 CCL11P51671 97 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 B3GALT5-AS1P59052 145 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 ZP4Q12836 540 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 ZNF239Q16600 458 aaKnown RBP8.32□□□□□ -1.08
LDHA-220ENST00000542179 SMN1Q16637 294 aaKnown RBP8.32□□□□□ -1.08
LDHA-220ENST00000542179 SYT14P1Q58G82 188 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 ALG10Q5BKT4 473 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 EMC4Q5J8M3 183 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 AADACL4Q5VUY2 407 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 NXNL2Q5VZ03 156 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 C3orf33Q6P1S2 294 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 ARHGAP11AQ6P4F7 1023 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 ZNF773Q6PK81 442 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 NANOGNBQ7Z5D8 188 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 FDCSPQ8NFU4 85 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 OR2M7Q8NG81 312 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 OR5J2Q8NH18 312 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 PLEKHA8Q96JA3 519 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 JSRP1Q96MG2 331 aaPredicted RBP8.32□□□□□ -1.08
LDHA-220ENST00000542179 SIGLEC11Q96RL6 698 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 IL4I1Q96RQ9 567 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 PIGQQ9BRB3 760 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
LDHA-220ENST00000542179 OR11A1Q9GZK7 315 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms