RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TRAV36DV7A0A075B6V5 113 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 M0R082 166 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 PDLIM1O00151 329 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 CXCR6O00574 342 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 LYZL6O75951 148 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 HPRP00739 348 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 NCK1P16333 377 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 CRYGSP22914 178 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 GRPRP30550 384 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SELENOWP63302 87 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SLC25A3Q00325 362 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ITGADQ13349 1161 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 PIN1Q13526 163 aaPredicted RBP8.59□□□□□ -1.03
YBX3-212ENST00000542002 P2RY6Q15077 328 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 LRRC23Q53EV4 343 aaPredicted RBP8.59□□□□□ -1.03
YBX3-212ENST00000542002 TSPO2Q5TGU0 170 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 FBXW9Q5XUX1 488 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 TMEM225Q6GV28 225 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ZNF613Q6PF04 617 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SEZ6L2Q6UXD5 910 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 LINGO2Q7L985 606 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 GPAT4Q86UL3 456 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 NKAIN4Q8IVV8 208 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ZNF100Q8IYN0 542 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 RNF148Q8N7C7 305 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 FAM156AQ8NDB6 213 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ZNF417Q8TAU3 575 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 TPD52L3Q96J77 140 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 LRRC37BQ96QE4 947 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ZNF587Q96SQ5 575 aaPredicted RBP8.59□□□□□ -1.03
YBX3-212ENST00000542002 TACO1Q9BSH4 297 aaKnown RBP8.59□□□□□ -1.03
YBX3-212ENST00000542002 MED18Q9BUE0 208 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SF3B5Q9BWJ5 86 aaKnown RBP8.59□□□□□ -1.03
YBX3-212ENST00000542002 TAPBPLQ9BX59 468 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 ALG2Q9H553 416 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 EVA1AQ9H8M9 152 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SLC7A10Q9NS82 523 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 SLC7A7Q9UM01 511 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 NAV2Q8IVL1 2488 aa8.59□□□□□ -1.03
YBX3-212ENST00000542002 TRAPPC13A5PLN9 417 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 J3KTA2 159 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 GPR171O14626 319 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 FFAR1O14842 300 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 CASKO14936 926 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 CHP2O43745 196 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 MRPL33O75394 65 aaKnown RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 AHSA1O95433 338 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 FAM107AO95990 144 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 T-ENOLP0DO92 83 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 HLA-DOBP13765 273 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 COX5AP20674 150 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 DNAJA1P31689 397 aaKnown RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 MSX2P35548 267 aaPredicted RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 YAP1P46937 504 aaKnown RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 SELENOPP49908 381 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 NCALDP61601 193 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 FAPQ12884 760 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 FOXD4Q12950 439 aaPredicted RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 TAB1Q15750 504 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 FAM69AQ5T7M9 428 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 ALKBH2Q6NS38 261 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 BHLHA15Q7RTS1 189 aaPredicted RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 ARPINQ7Z6K5 226 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 LRRC17Q8N6Y2 441 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 ZNF433Q8N7K0 673 aaPredicted RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 RBM15BQ8NDT2 890 aaKnown RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 RASSF5Q8WWW0 418 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 PROX1Q92786 737 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 TMEM45BQ96B21 275 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 APH1AQ96BI3 265 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 SLC41A3Q96GZ6 507 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 TMEM43Q9BTV4 400 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 ZNF426Q9BUY5 554 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 HDHD5Q9BXW7 423 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 AMBRA1Q9C0C7 1298 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 MEPEQ9NQ76 525 aaPredicted RBP8.58□□□□□ -1.04
YBX3-212ENST00000542002 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 CD300AQ9UGN4 299 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 EGFL7Q9UHF1 273 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 TAGLN3Q9UI15 199 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 RIMS3Q9UJD0 308 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 BAG5Q9UL15 447 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 A4GNTQ9UNA3 340 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 OTOGQ6ZRI0 2925 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 POLQO75417 2590 aa8.58□□□□□ -1.04
YBX3-212ENST00000542002 MPDZO75970 2070 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 PLPP3O14495 311 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 OR2T1O43869 369 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 UPK3AO75631 287 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 ZNF432O94892 652 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 CNOT4O95628 575 aaKnown RBP8.57□□□□□ -1.04
YBX3-212ENST00000542002 PLAUP00749 431 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 SERPINA1P01009 418 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 ITGA5P08648 1049 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 GGT1P19440 569 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 SWT1Q5T5J6 900 aaKnown RBP8.57□□□□□ -1.04
YBX3-212ENST00000542002 C9orf135Q5VTT2 229 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 CASP12Q6UXS9 341 aa8.57□□□□□ -1.04
YBX3-212ENST00000542002 DEF8Q6ZN54 512 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms