RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 OR2A2Q6IF42 318 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 PGM2L1Q6PCE3 622 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF613Q6PF04 617 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 CARM1Q86X55 608 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 HIPK1Q86Z02 1210 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 WFDC8Q8IUA0 241 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF610Q8N9Z0 462 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 FAM156AQ8NDB6 213 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 OR4D11Q8NGI4 311 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 OR6T1Q8NGN1 323 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 DNAJA4Q8WW22 397 aaPredicted RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 GEMIN6Q8WXD5 167 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 C3orf49Q96BT1 292 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 KLHL15Q96M94 604 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 MCHR1Q99705 422 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 WFDC6Q9BQY6 131 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 THTPAQ9BU02 230 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 REG4Q9BYZ8 158 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TMEM27Q9HBJ8 222 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 ACTR3BQ9P1U1 418 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 RPS6KB2Q9UBS0 482 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 PROCRQ9UNN8 238 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SAMD4AQ9UPU9 718 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 SH3GLB1Q9Y371 365 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 TMED7Q9Y3B3 224 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 PCNX3Q9H6A9 2034 aa7.74□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A0J9YW62 118 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A1B0GWA3 101 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A1B0GX12 115 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 EBAG9O00559 213 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TLX2O43763 284 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 DNAJC8O75937 253 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 CRHP06850 196 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 PNMTP11086 282 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 CXCR1P25024 350 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 LOXP28300 417 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 IDUAP35475 653 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 KIR2DL2P43627 348 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 RPS4XP62701 263 aaKnown RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TMEM176BQ3YBM2 270 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 IFI44LQ53G44 452 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 BEX5Q5H9J7 111 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 MTX3Q5HYI7 312 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ENTPD8Q5MY95 495 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ULK3Q6PHR2 472 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 C5orf46Q6UWT4 87 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 C22orf34Q6ZV56 151 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 VTCN1Q7Z7D3 282 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 CADM2Q8N3J6 435 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 OR10D3Q8NH80 312 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 OR2V1Q8NHB1 315 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 STK35Q8TDR2 534 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ADAMTS16Q8TE57 1224 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 AKAP1Q92667 903 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 POP5Q969H6 163 aaKnown RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC38A4Q969I6 547 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 GTPBP3Q969Y2 492 aaKnown RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 DDIT4LQ96D03 193 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ASB9Q96DX5 294 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 SLC47A1Q96FL8 570 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TRMT61AQ96FX7 289 aaKnown RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 PLPPR2Q96GM1 343 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TPD52L3Q96J77 140 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 NSMCE2Q96MF7 247 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 POTEKPQ9BYX7 375 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TMEM185BQ9H7F4 350 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TIGARQ9NQ88 270 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF701Q9NV72 531 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 SELENONQ9NZV5 590 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 TRAPPC4Q9Y296 219 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 HDGFL3Q9Y3E1 203 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF175Q9Y473 711 aa7.73□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A087WUJ7 227 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TMEM72A0PK05 275 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TRAPPC13A5PLN9 417 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 A8MV72 311 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 A8MVM7 634 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 H0YC42 278 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 EIF1AYO14602 144 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 ACOT8O14734 319 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TNFSF11O14788 317 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 HS3ST1O14792 307 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 GSC2O15499 205 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 DNPH1O43598 174 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CHP2O43745 196 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CD5LO43866 347 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 NPIPB7O75200 414 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 PDE5AO76074 875 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 OR5F1O95221 314 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 PMS2P2O95744 297 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF682O95780 498 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 F12P00748 615 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 THRBP10828 461 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 PAX1P15863 534 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TNFRSF1BP20333 461 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 SHC1P29353 583 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms