RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 DLL3Q9NYJ7 618 aa7.9□□□□□ -1.15
THBS3-210ENST00000541576 IL20Q9NYY1 176 aa7.9□□□□□ -1.15
THBS3-210ENST00000541576 MALT1Q9UDY8 824 aa7.9□□□□□ -1.15
THBS3-210ENST00000541576 IL20RAQ9UHF4 553 aa7.9□□□□□ -1.15
THBS3-210ENST00000541576 FBXO9Q9UK97 447 aaPredicted RBP7.9□□□□□ -1.15
THBS3-210ENST00000541576 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.15
THBS3-210ENST00000541576 CDH10Q9Y6N8 788 aa7.9□□□□□ -1.15
THBS3-210ENST00000541576 FREM2Q5SZK8 3169 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 DOCK10Q96BY6 2186 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 MPZL2O60487 215 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 GABARAPO95166 117 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 GP1BBP13224 206 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SDHBP21912 280 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SMSP52788 366 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 TGIF1Q15583 401 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 CLEC12AQ5QGZ9 265 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SIGIRRQ6IA17 410 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SLC27A4Q6P1M0 643 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 PTCHD4Q6ZW05 846 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 DND1Q8IYX4 353 aaKnown RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 GPR119Q8TDV5 335 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SNAPC3Q92966 411 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 IP6K3Q96PC2 410 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SLC19A3Q9BZV2 496 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 ADAM19Q9H013 955 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 C12orf10Q9HB07 376 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 RYDENQ9NUL5 291 aaKnown RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 PPP4R1LQ9P1A2 415 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 WIF1Q9Y5W5 379 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 CHCHD2Q9Y6H1 151 aaPredicted RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 B4DXG7 233 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 CDC40O60508 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
THBS3-210ENST00000541576 JUNBP17275 347 aaPredicted RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 ATF4P18848 351 aaPredicted RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 SUMO3P55854 103 aaPredicted RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 FXYD6P3P58550 94 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SLC35A2P78381 396 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 QPRTQ15274 297 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 MED22Q15528 200 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 AGAP6Q5VW22 663 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 BCDIN3DQ7Z5W3 292 aaKnown RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 SIRT6Q8N6T7 355 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 CLDN22Q8N7P3 220 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 FANK1Q8TC84 345 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 BRIX1Q8TDN6 353 aaKnown RBP7.89□□□□□ -1.15
THBS3-210ENST00000541576 AGAP4Q96P64 663 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 TSSK6Q9BXA6 273 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 SLC25A19Q9HC21 320 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 CPNE5Q9HCH3 593 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 HPF1Q9NWY4 346 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 TAS2R10Q9NYW0 307 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 TVP23BQ9NYZ1 205 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 PCSK5Q92824 1860 aa7.89□□□□□ -1.15
THBS3-210ENST00000541576 IGKV1D-42A0A075B6H8 117 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 ANKUB1A6NFN9 424 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 AKR7A2O43488 359 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PRKYO43930 277 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PCMT1P22061 227 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 CXCR1P25024 350 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PTGDSP41222 190 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 EFNB1P98172 346 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 Q5BKY6 102 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 DCAF10Q5QP82 559 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 H3F3CQ6NXT2 135 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 GLCCI1Q86VQ1 547 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TCEANCQ8N8B7 351 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR13C2Q8NGS9 318 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR4Q3Q8NH05 313 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SGTBQ96EQ0 304 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SAMD8Q96LT4 415 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SECISBP2Q96T21 854 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 SMAD5Q99717 465 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 TMEM43Q9BTV4 400 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR52D1Q9H346 318 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 MED11Q9P086 117 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OSGIN1Q9UJX0 560 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 CELSR3Q9NYQ7 3312 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TSPAN4O14817 238 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 RCBTB2O95199 551 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 LIPCP11150 499 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 BMP7P18075 431 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 MSX1P28360 303 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 GRK5P34947 590 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 P2RX3P56373 397 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 GABARAPL2P60520 117 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TEKQ02763 1124 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SNTA1Q13424 505 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TIGD6Q17RP2 521 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 B3GNTL1Q67FW5 361 aaPredicted RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 RPL13AP3Q6NVV1 102 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SLC30A6Q6NXT4 461 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 GRINAQ7Z429 371 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OAFQ86UD1 273 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR52L1Q8NGH7 329 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR8J1Q8NGP2 316 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TMEM234Q8WY98 164 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms