RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 STX5Q13190 355 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 KLF5Q13887 457 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 UPP1Q16831 310 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 CCDC58Q4VC31 144 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 FAM69BQ5VUD6 431 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 C1orf94Q6P1W5 598 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PAQR6Q6TCH4 344 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PLEKHG7Q6ZR37 379 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 RTL4Q6ZR62 310 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ASRGL1Q7L266 308 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 POLNQ7Z5Q5 900 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PALB2Q86YC2 1186 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 MARCH9Q86YJ5 346 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 APRG1Q8IVJ8 170 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 DCUN1D3Q8IWE4 304 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 RCOR2Q8IZ40 523 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 SLC39A11Q8N1S5 342 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 NUBPLQ8TB37 319 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 MAGEC3Q8TD91 643 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 SORCS1Q8WY21 1168 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ING5Q8WYH8 240 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 OTUB2Q96DC9 234 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 RMND5BQ96G75 393 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 ANKRD36BP1Q96IX9 119 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 SERAC1Q96JX3 654 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 C3orf30Q96M34 536 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 JSRP1Q96MG2 331 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 MBOAT4Q96T53 435 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 DHRS9Q9BPW9 319 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 KXD1Q9BQD3 176 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 CALN1Q9BXU9 219 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 NAT10Q9H0A0 1025 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 GPN2Q9H9Y4 310 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 FAM53CQ9NYF3 392 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 GPR83Q9NYM4 423 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ZNF319Q9P2F9 582 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 APOBEC3BQ9UH17 382 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 UTS2RQ9UKP6 389 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PRPF19Q9UMS4 504 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 SCML1Q9UN30 329 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ZFR2Q9UPR6 939 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 ERGIC3Q9Y282 383 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PLLPQ9Y342 182 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 TSC22D4Q9Y3Q8 395 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PCDHGB1Q9Y5G3 927 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 COLEC10Q9Y6Z7 277 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 DOCK6Q96HP0 2047 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 CDH23Q9H251 3354 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PRUNE2Q8WUY3 3088 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 KIR2DS5A0A0G2JLQ3 304 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TMEM213A2RRL7 107 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 LRP5LA4QPB2 252 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 OR5K3A6NET4 321 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CCDC182A6NF36 153 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 E7ESA3 106 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 MKRN2OSH3BPM6 223 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TMEM178BH3BS89 294 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 J3KR12 359 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 KIR2DS3K7RE56 304 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 PIRO00625 290 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 IMPA2O14732 288 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SH2D1BO14796 132 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 EMC8O43402 210 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 RAMP3O60896 148 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 NDUFS7O75251 213 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TOXO94900 526 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 NDUFA10O95299 355 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TNNC2P02585 160 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 RPN2P04844 631 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CHRM5P08912 532 aaPredicted RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 ACP2P11117 423 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SPINK2P20155 84 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 KITLGP21583 273 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CA4P22748 312 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CD1CP29017 333 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TMPRSS3P57727 454 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 LCN2P80188 198 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TFAMQ00059 246 aaKnown RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 HSF1Q00613 529 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 MYL5Q02045 173 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 NHLH1Q02575 133 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 KLRB1Q12918 225 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 FOXE3Q13461 319 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 OPCMLQ14982 345 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 ATXN7L3Q14CW9 347 aaPredicted RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 CTF1Q16619 201 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 PPP1R3AQ16821 1122 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 C1orf220Q5T0J3 134 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 ASPHD1Q5U4P2 390 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 RNLSQ5VYX0 342 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 PRMT9Q6P2P2 845 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CD300LGQ6UXG3 332 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 TMEM64Q6YI46 380 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 C17orf107Q6ZR85 190 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SLC29A4Q7RTT9 530 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms