RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 LYPD3O95274 346 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 IGHV1-2P23083 117 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 IL32P24001 234 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 DNAJA1P31689 397 aaKnown RBP11.58□□□□□ -0.56
LTBR-208ENST00000541005 KDELR2P33947 212 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 SLC7A2P52569 658 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 LIPEQ05469 1076 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 MFSD13AQ14CX5 517 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 ENTPD8Q5MY95 495 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 SEZ6L2Q6UXD5 910 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 PAMR1Q6UXH9 720 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
LTBR-208ENST00000541005 SSX8Q7RTT4 187 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 TSPYL5Q86VY4 417 aaPredicted RBP11.58□□□□□ -0.56
LTBR-208ENST00000541005 ZIC4Q8N9L1 334 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 PROX1Q92786 737 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 ZNF426Q9BUY5 554 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 POLR2J2Q9GZM3 115 aaKnown RBP11.58□□□□□ -0.56
LTBR-208ENST00000541005 POLR2J3Q9H1A7 115 aaKnown RBP11.58□□□□□ -0.56
LTBR-208ENST00000541005 B3GALT5Q9Y2C3 310 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 CORINQ9Y5Q5 1042 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 LOC102725191A0A1B0GVB3 256 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 KLF4O43474 513 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 THY1P04216 161 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 GTF2E2P29084 291 aaKnown RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 CYBRD1Q53TN4 286 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 BEX5Q5H9J7 111 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 CASP12Q6UXS9 341 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 WDR88Q6ZMY6 472 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 P2RY8Q86VZ1 359 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 CARM1Q86X55 608 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 RBM45Q8IUH3 476 aaKnown RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 ZNF433Q8N7K0 673 aaPredicted RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 ANKS4BQ8N8V4 417 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 SCAIQ8N9R8 606 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 HSD17B8Q92506 261 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 NRGNQ92686 78 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 SLC41A3Q96GZ6 507 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ZC3HAV1LQ96H79 300 aaKnown RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 MPP4Q96JB8 637 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ZNF385AQ96PM9 386 aaKnown RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 AMBRA1Q9C0C7 1298 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ALG2Q9H553 416 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ASB6Q9NWX5 421 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 FAM53CQ9NYF3 392 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 TAS2R16Q9NYV7 291 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 C6orf203Q9P0P8 240 aaPredicted RBP11.57□□□□□ -0.56
LTBR-208ENST00000541005 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ST6GALNAC2Q9UJ37 374 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 EDARQ9UNE0 448 aa11.57□□□□□ -0.56
LTBR-208ENST00000541005 ITPR3Q14573 2671 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 CPSF4LA6NMK7 179 aaKnown RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 ENO4A6NNW6 628 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 M0R082 166 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 DCTN3O75935 186 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 LYZL6O75951 148 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 MT-ATP6P00846 226 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 BGLAPP02818 100 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 GSK3BP49841 420 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 NR1H2P55055 460 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 TESK1Q15569 626 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 TSC22D1Q15714 1073 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 TAB1Q15750 504 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 C1QTNF12Q5T7M4 302 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 FBXW10Q5XX13 1052 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 CREB3L2Q70SY1 520 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 GPAT4Q86UL3 456 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 EPHX4Q8IUS5 362 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 POMGNT2Q8NAT1 580 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 C1orf162Q8NEQ5 155 aaPredicted RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 VANGL1Q8TAA9 524 aaPredicted RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 ZNF417Q8TAU3 575 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 SLC25A36Q96CQ1 311 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 OXGR1Q96P68 337 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 LRRC37BQ96QE4 947 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 ZNF587Q96SQ5 575 aaPredicted RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 SLC19A3Q9BZV2 496 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 SPAG4Q9NPE6 437 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 MRPL39Q9NYK5 338 aaKnown RBP11.56□□□□□ -0.56
LTBR-208ENST00000541005 RCE1Q9Y256 329 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 SH3GLB1Q9Y371 365 aa11.56□□□□□ -0.56
LTBR-208ENST00000541005 OR6C65A6NJZ3 312 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 OR5H1A6NKK0 313 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 CXCR6O00574 342 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 OR5F1O95221 314 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 IGHV3-9P01782 118 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 ITGA5P08648 1049 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 THRBP10828 461 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 GGT1P19440 569 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 GRPRP30550 384 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 PSME3P61289 254 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms