RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ANXA2P2A6NMY6 339 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 C2orf74A8MZ97 194 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 LRRN3E7EW58 273 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 G3V3Q6 166 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 GPR31O00270 319 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 PRAF2O60831 178 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 LATS1O95835 1130 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 SLC16A8O95907 504 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 IGHA1P01876 353 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 HPXP02790 462 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 RLN2P04090 185 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 SPP1P10451 314 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 C5AR1P21730 350 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 HNRNPA2B1P22626 353 aaKnown RBP4.84□□□□□ -1.64
PROM1-220ENST00000540805 THBS2P35442 1172 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 CAPZA1P52907 286 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 DGCR2P98153 550 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 BDH1Q02338 343 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 MAP4K2Q12851 820 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 FAM69BQ5VUD6 431 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 LYSMD4Q5XG99 296 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 SLC22A10Q63ZE4 541 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 TMEM225Q6GV28 225 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 FIGNL1Q6PIW4 674 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 HTR3DQ70Z44 454 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 C6orf120Q7Z4R8 191 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 TECPR1Q7Z6L1 1165 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 MRGPREQ86SM8 312 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 CSNK1A1LQ8N752 337 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 CLRN3Q8NCR9 226 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 MORN4Q8NDC4 146 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 OR5T3Q8NGG3 340 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 GCDHQ92947 438 aaPredicted RBP4.84□□□□□ -1.64
PROM1-220ENST00000540805 ECHDC3Q96DC8 303 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 RSPO3Q9BXY4 272 aaPredicted RBP4.84□□□□□ -1.64
PROM1-220ENST00000540805 C20orf85Q9H1P6 137 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 LRRN3Q9H3W5 708 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 C8orf33Q9H7E9 229 aaPredicted RBP4.84□□□□□ -1.64
PROM1-220ENST00000540805 EVA1AQ9H8M9 152 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 PRDM9Q9NQV7 894 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 MAN2C1Q9NTJ4 1040 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 P2RX2Q9UBL9 471 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 MAFFQ9ULX9 164 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 EXOGQ9Y2C4 368 aaKnown RBP4.84□□□□□ -1.64
PROM1-220ENST00000540805 COL4A2P08572 1712 aa4.84□□□□□ -1.64
PROM1-220ENST00000540805 HMGN4O00479 90 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SLCO2B1O94956 709 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 UBL3O95164 117 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 IGF2P01344 180 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TFP02787 698 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SPINT3P49223 89 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SNRPEP62304 92 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 SLC7A9P82251 487 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 LSM11P83369 360 aaKnown RBP eCLIP4.83□□□□□ -1.64
PROM1-220ENST00000540805 TRIM61Q5EBN2 209 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZNF311Q5JNZ3 666 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TMEM215Q68D42 235 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 RGS7BPQ6MZT1 257 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZC3H14Q6PJT7 736 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 UNQ6494/PRO21346Q6UXR6 183 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 FAM83HQ6ZRV2 1179 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 ASPGQ86U10 573 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 LRRC56Q8IYG6 542 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 TDHQ8IZJ6 230 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZNF565Q8N9K5 539 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 FIBINQ8TAL6 211 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 PIGXQ8TBF5 258 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CNOT9Q92600 299 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 DIO2Q92813 273 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZFP3Q96NJ6 502 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 LRRC3BQ96PB8 259 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TRIM2Q9C040 744 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MIOXQ9UGB7 285 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 KLF2Q9Y5W3 355 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 PMS2P1A4D2B8 440 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TRABD2BA6NFA1 517 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 DUXAA6NLW8 204 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SMAD9O15198 467 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 ZNF217O75362 1048 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 LDOC1O95751 146 aaPredicted RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 RLN1P04808 185 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 C1GALT1C1LP0DN25 315 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 CXCL2P19875 107 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 DRD1P21728 446 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 HTR1FP30939 366 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 GABRA3P34903 492 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 P2RY2P41231 377 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 MMP15P51511 669 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 OR10A3P58181 314 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TBPL1P62380 186 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 FGL1Q08830 312 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TSPAN31Q12999 210 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SNTB2Q13425 540 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 TDGQ13569 410 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 TGIF1Q15583 401 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 SYPL1Q16563 259 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 DECR1Q16698 335 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 HNRNPA1L2Q32P51 320 aaKnown RBP4.83□□□□□ -1.64
PROM1-220ENST00000540805 TMEM240Q5SV17 173 aa4.83□□□□□ -1.64
PROM1-220ENST00000540805 AADACL4Q5VUY2 407 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms