RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	HCAR1	Q9BXC0	346 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR51V1	Q9H2C8	321 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PTRH2	Q9Y3E5	179 aa	Known RBP	5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR10H1	Q9Y4A9	318 aa		5.22	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM186A	A6NE01	2351 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		J3QLW9	94 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SIX6	O95475	246 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TF	P02787	698 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LPL	P06858	475 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CD59	P13987	128 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF19	P17023	458 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CXCL2	P19875	107 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPR2	P20594	1047 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NT5E	P21589	574 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ATP5A1	P25705	553 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRHR	P34981	398 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TSFM	P43897	325 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ENTPD8	Q5MY95	495 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AADACL4	Q5VUY2	407 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NKAIN2	Q5VXU1	208 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC25A25	Q6KCM7	469 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C17orf107	Q6ZR85	190 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NRROS	Q86YC3	692 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRSS58	Q8IYP2	241 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52H1	Q8NGJ2	320 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DOK4	Q8TEW6	326 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PATE1	Q8WXA2	126 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ERMAP	Q96PL5	475 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ALG8	Q9BVK2	526 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DDA1	Q9BW61	102 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SAV1	Q9H4B6	383 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RYDEN	Q9NUL5	291 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MRPL39	Q9NYK5	338 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRODH2	Q9UF12	536 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACAD8	Q9UKU7	415 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ICK	Q9UPZ9	632 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LIPT1	Q9Y234	373 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MMACHC	Q9Y4U1	282 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TECTA	O75443	2155 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HELZ	P42694	1942 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRABD2B	A6NFA1	517 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KDM4E	B2RXH2	506 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		H0YGG7	62 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CHST10	O43529	356 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMPRSS11D	O60235	418 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KDM4B	O94953	1096 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADRB1	P08588	477 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SULT1A3	P0DMM9	295 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SULT1A4	P0DMN0	295 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PSMB5	P28074	263 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACADL	P28330	430 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OTX2	P32243	289 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MPI	P34949	423 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HCCS	P53701	268 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARF3	P61204	181 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC25A30	Q5SVS4	291 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C3P1	Q6ZMU1	363 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	POGLUT1	Q8NBL1	392 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR2L5	Q8NG80	312 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR51Q1	Q8NH59	317 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SGTB	Q96EQ0	304 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC35G5	Q96KT7	338 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ENKD1	Q9H0I2	346 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LIN7B	Q9HAP6	207 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CA10	Q9NS85	328 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MRPS18A	Q9NVS2	196 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BABAM2	Q9NXR7	383 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	P2RX2	Q9UBL9	471 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SCP2D1	Q9UJQ7	156 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CBLC	Q9ULV8	474 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ASB4	Q9Y574	426 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DAPL1	A0PJW8	107 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC22A23	A1A5C7	686 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANTXRL	A6NF34	631 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C21orf140	B9A014	251 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		L7N2F9	121 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FOXE1	O00358	373 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PGRMC2	O15173	223 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SURF4	O15260	269 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TBX6	O95947	436 aa	Predicted RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	APOC3	P02656	99 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GYPB	P06028	91 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CLU	P10909	449 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DRD2	P14416	443 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PAICS	P22234	425 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PTBP1	P26599	531 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RAD52	P43351	418 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RFX3	P48380	749 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRA2B	P62995	288 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRR5	P85299	388 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	REEP5	Q00765	189 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF273	Q14593	569 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NKAIN1	Q4KMZ8	207 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ABHD17B	Q5VST6	288 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PYHIN1	Q6K0P9	492 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRFN4	Q6PJG9	635 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NHLRC1	Q6VVB1	395 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms