RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 IGHV4-61A0A0C4DH41 118 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 FRS3O43559 492 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 NPIPB7O75200 414 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 LGI1O95970 557 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 IGKV3-15P01624 115 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 IGLV1-44P01699 117 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ALDOCP09972 364 aaKnown RBP10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 TFPTP0C1Z6 253 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 GKN3PP0CG01 181 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 IL12AP29459 219 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 CDKN2CP42773 168 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 SELENOPP49908 381 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 IDH3GP51553 393 aaPredicted RBP10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 CRISP3P54108 245 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 NAAAQ02083 359 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 MAPK11Q15759 364 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 IQCCQ4KMZ1 466 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 COX20Q5RI15 118 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 C1orf140Q5VVS0 124 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 PRAMEF8Q5VWM4 474 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 PRAMEF7Q5VXH5 474 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ANKRD16Q6P6B7 361 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF836Q6ZNA1 936 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 SPATA19Q7Z5L4 167 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 EPHX4Q8IUS5 362 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 NUP37Q8NFH4 326 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 STK35Q8TDR2 534 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ALKBH3Q96Q83 286 aaPredicted RBP10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 VRK1Q99986 396 aaPredicted RBP10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 BPESC1Q9GZL8 116 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 RAB1BQ9H0U4 201 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF442Q9H7R0 627 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 RLIMQ9NVW2 624 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 ADPRHL2Q9NX46 363 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 RCE1Q9Y256 329 aa10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 YLPM1P49750 1951 aaKnown RBP10.44□□□□□ -0.74
CBX3P4-202ENST00000540428 VSTM5A8MXK1 200 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 TMEM229AB2RXF0 380 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 RFXANKO14593 260 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 RGS16O15492 202 aaPredicted RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 FZD7O75084 574 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 UPK3AO75631 287 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 TGFAP01135 160 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 GSNP06396 782 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 ERCC1P07992 297 aaPredicted RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 OR4A8P0C604 315 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 CECR9P0C854 216 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 BGNP21810 368 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 GIFP27352 417 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 MVDP53602 400 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 BNIP2Q12982 314 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 STX3Q13277 289 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 KRT71Q3SY84 523 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 LIPNQ5VXI9 398 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 NIPAL3Q6P499 406 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 VRK2Q86Y07 508 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 CADM2Q8N3J6 435 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 MREGQ8N565 214 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 ANKS4BQ8N8V4 417 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 MFSD8Q8NHS3 518 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 PNPT1Q8TCS8 783 aaKnown RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 HPS1Q92902 700 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC35B4Q969S0 331 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 C3orf49Q96BT1 292 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 NELFAQ9H3P2 528 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 ARMC7Q9H6L4 198 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 THUMPD1Q9NXG2 353 aaKnown RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF443Q9Y2A4 671 aaPredicted RBP10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 GPR45Q9Y5Y3 372 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 ARFGEF3Q5TH69 2177 aa10.43□□□□□ -0.74
CBX3P4-202ENST00000540428 HEATR1Q9H583 2144 aaKnown RBP10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 FTCDNL1E5RQL4 147 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 SDHDO14521 159 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 AHSA1O95433 338 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 STAMBPO95630 424 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 IL6P05231 212 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 C8BP07358 591 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 ZCCHC18P0CG32 403 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 CBR1P16152 277 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 NCF2P19878 526 aaPredicted RBP10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 CALCRP30988 508 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 NME5P56597 212 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 ROR2Q01974 943 aaKnown RBP10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 LARS2Q15031 903 aaKnown RBP10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 CARTPTQ16568 116 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 WDR93Q6P2C0 686 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 UGT2A3Q6UWM9 527 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 LINGO2Q7L985 606 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 CCDC36Q8IYA8 594 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 ANKRD27Q96NW4 1050 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 DOK1Q99704 481 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 SPATA9Q9BWV2 254 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 CACYBPQ9HB71 228 aaKnown RBP10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF232Q9UNY5 417 aa10.42□□□□□ -0.74
CBX3P4-202ENST00000540428 IFT52Q9Y366 437 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms