RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LYRM4Q9HD34 91 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 NCDNQ9UBB6 729 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 H0YC42 278 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 PIN1P1O15428 100 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TNFSF14O43557 240 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 KCNJ13O60928 360 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 SCO1O75880 301 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 NKX2-2O95096 273 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ZFPL1O95159 310 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TNFP01375 233 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 MYF5P13349 255 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 SPI1P17947 270 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 GDNFP39905 211 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 RPS11P62280 158 aaKnown RBP eCLIP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 RPL6Q02878 288 aaKnown RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 SQSTM1Q13501 440 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 ST3GAL2Q16842 350 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 SHISA6Q6ZSJ9 500 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
BNIP3-202ENST00000540159 OR51A4Q8NGJ6 313 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 CTHRC1Q96CG8 243 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 TGM7Q96PF1 710 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 OR51J1Q9H342 316 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 PRTFDC1Q9NRG1 225 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 CHRNA9Q9UGM1 479 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
BNIP3-202ENST00000540159 FREM3P0C091 2139 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ALX3O95076 343 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 HRGP04196 525 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 CT45A8P0DMV1 189 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 CT45A9P0DMV2 189 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 STOMP27105 288 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 CT45A2Q5DJT8 189 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 C1QL3Q5VWW1 255 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 TOR1AIP2Q8NFQ8 470 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 SMIM19Q96E16 107 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
BNIP3-202ENST00000540159 DPCDQ9BVM2 203 aaPredicted RBP12.49□□□□□ -0.41
BNIP3-202ENST00000540159 Q9N2J8 555 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 CD207Q9UJ71 328 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 A0A087WV62 115 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 SLC35E2P0CK97 266 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ADH7P40394 386 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 VEGFCP49767 419 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF81P51508 661 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 UBE2MP61081 183 aaKnown RBP12.49□□□□□ -0.41
BNIP3-202ENST00000540159 POU4F3Q15319 338 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 PYHIN1Q6K0P9 492 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 MED25Q71SY5 747 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 BCORP1Q8N888 145 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 PPP1R14AQ96A00 147 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 EIF3KQ9UBQ5 218 aaKnown RBP12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 ATG2AQ2TAZ0 1938 aa12.49□□□□□ -0.41
BNIP3-202ENST00000540159 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 CFL1P23528 166 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ITPKBP27987 946 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 RAB38P57729 211 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 GNG2P59768 71 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 CTXN1P60606 82 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 YOD1Q5VVQ6 348 aaPredicted RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 OR5M10Q6IEU7 315 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 APOOLQ6UXV4 268 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 PXKQ7Z7A4 578 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 TMEM151BQ8IW70 566 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 OR2T4Q8NH00 348 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SLC25A36Q96CQ1 311 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 VSTM2LQ96N03 204 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SLX1AQ9BQ83 275 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 TRIM2Q9C040 744 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SLCO1C1Q9NYB5 712 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 DHCR7Q9UBM7 475 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 OR5K3A6NET4 321 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 FOXS1O43638 330 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 HLA-DQA2P01906 255 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SRMP19623 302 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SLC25A25Q6KCM7 469 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 OR6N2Q8NGY6 317 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF563Q8TA94 476 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 THEM6Q8WUY1 208 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 GFI1Q99684 422 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms