RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 EVX1P49640 407 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 SELENOPP49908 381 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 TMEM33P57088 247 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 PLAURQ03405 335 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CEACAM7Q14002 265 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 UGT3A2Q3SY77 523 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 C1orf229Q6ZS94 237 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 LINGO2Q7L985 606 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 GPAT4Q86UL3 456 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CARM1Q86X55 608 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 RIMKLAQ8IXN7 391 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CLEC4FQ8N1N0 589 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 IL17RDQ8NFM7 739 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 MIPOL1Q8TD10 442 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 XAGE5Q8WWM1 108 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 RDH5Q92781 318 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 SLC35G5Q96KT7 338 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 DUSP26Q9BV47 211 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 SUCNR1Q9BXA5 334 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 OR51I1Q9H343 314 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 NELFAQ9H3P2 528 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 MS4A5Q9H3V2 200 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 TREM2Q9NZC2 230 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 REV1Q9UBZ9 1251 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 GIMAP2Q9UG22 337 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CMAHPQ9Y471 501 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 LOC105371242A0A075B767 164 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 CLDN24A6NM45 220 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 TMEM229AB2RXF0 380 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 AP3D1O14617 1153 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 WNT9BO14905 357 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 PIP5K1BO14986 540 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 SYNGR3O43761 229 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 PEX11AO75192 247 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 UPK3AO75631 287 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 VAMP5O95183 116 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 AVPP01185 164 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 NUDT17P0C025 328 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 OR12D1P0DN82 309 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ANPEPP15144 967 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ACHEP22303 614 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ARR3P36575 388 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 CCT5P48643 541 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 SH3BGRP55822 239 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 LMO4P61968 165 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 FOXL1Q12952 345 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 DAG1Q14118 895 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 OR7A5Q15622 319 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ATP6AP1LQ52LC2 224 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ATAD3BQ5T9A4 648 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 MYPOPQ86VE0 399 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 CCDC63Q8NA47 563 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 TWIST2Q8WVJ9 160 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 MRPL24Q96A35 216 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ROPN1LQ96C74 230 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 ALKBH3Q96Q83 286 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 LINC00470Q9BZP3 86 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 SLC52A3Q9NQ40 469 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 G6PC2Q9NQR9 355 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 PSMC3IPQ9P2W1 217 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 TBK1Q9UHD2 729 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 TRRAPQ9Y4A5 3859 aa10.01□□□□□ -0.81
CLSTN3-209ENST00000539982 RNF103-CHMP3A0A140T963 221 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 RPL36A-HNRNPH2H7BZ11 118 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 FAAHO00519 579 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 SCN2BO60939 215 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 BCL10O95999 233 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 HPXP02790 462 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 NR4A1P22736 598 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 CRHR1P34998 444 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 P2RY4P51582 365 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 ARF1P84077 181 aaKnown RBP10□□□□□ -0.81
CLSTN3-209ENST00000539982 ROR2Q01974 943 aaKnown RBP10□□□□□ -0.81
CLSTN3-209ENST00000539982 SNTB2Q13425 540 aaKnown RBP10□□□□□ -0.81
CLSTN3-209ENST00000539982 C6orf136Q5SQH8 315 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 IL23RQ5VWK5 629 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 REP15Q6BDI9 236 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 NIPAL3Q6P499 406 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 TREML4Q6UXN2 200 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 HMGN2P46Q86SG4 172 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 LSRQ86X29 649 aaPredicted RBP10□□□□□ -0.81
CLSTN3-209ENST00000539982 EPHX4Q8IUS5 362 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 C10orf107Q8IVU9 208 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 CMIPQ8IY22 773 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 CLECL1Q8IZS7 167 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 ZDHHC22Q8N966 263 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 RAB8BQ92930 207 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 C1orf50Q9BV19 199 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 GATA5Q9BWX5 397 aaPredicted RBP10□□□□□ -0.81
CLSTN3-209ENST00000539982 NOX3Q9HBY0 568 aa10□□□□□ -0.81
CLSTN3-209ENST00000539982 CRLF2Q9HC73 371 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms