RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DNAJA3Q96EY1 480 aa13.85□□□□□ -0.19
DDB1-216ENST00000539739 NDEL1Q9GZM8 345 aa13.85□□□□□ -0.19
DDB1-216ENST00000539739 COQ10BQ9H8M1 238 aa13.85□□□□□ -0.19
DDB1-216ENST00000539739 PNPLA3Q9NST1 481 aa13.85□□□□□ -0.19
DDB1-216ENST00000539739 ZNF835Q9Y2P0 537 aa13.85□□□□□ -0.19
DDB1-216ENST00000539739 CXCL13O43927 109 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 OR10H3O60404 316 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 WDR1O75083 606 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 CCNB2O95067 398 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 SYNGR4O95473 234 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 HOXD4P09016 255 aaPredicted RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 FPR1P21462 350 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 LIMS1P48059 325 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 CASP6P55212 293 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 NUP107P57740 925 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 GTF3C1Q12789 2109 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 PPP1R8Q12972 351 aaKnown RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 OR7A5Q15622 319 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 AMIGO2Q86SJ2 522 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 NRMQ8IXM6 262 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 OR4K5Q8NGD3 323 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 PFN4Q8NHR9 129 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 PIGXQ8TBF5 258 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 TAAR8Q969N4 342 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 CPNE4Q96A23 557 aaPredicted RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 SLC25A36Q96CQ1 311 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 SGTBQ96EQ0 304 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 CENPNQ96H22 339 aaPredicted RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 FUZQ9BT04 418 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 MEPEQ9NQ76 525 aaPredicted RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 TBC1D23Q9NUY8 699 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 MCTS1Q9ULC4 181 aaKnown RBP13.84□□□□□ -0.19
DDB1-216ENST00000539739 TMEM5Q9Y2B1 443 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 KALRNO60229 2985 aa13.84□□□□□ -0.19
DDB1-216ENST00000539739 LIPT2A6NK58 231 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 DNPH1O43598 174 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 EIF1BO60739 113 aaKnown RBP13.83□□□□□ -0.2
DDB1-216ENST00000539739 C1QL1O75973 258 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 BAG2O95816 211 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 CH25HO95992 272 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 MT-ATP6P00846 226 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 IFI30P13284 250 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 PRKCDQ05655 676 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 SEC23BQ15437 767 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 MICAQ29983 383 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 PPP4R4Q6NUP7 873 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 Q6ZPB1 254 aaPredicted RBP13.83□□□□□ -0.2
DDB1-216ENST00000539739 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
DDB1-216ENST00000539739 GALNT11Q8NCW6 608 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 OR4C15Q8NGM1 316 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 BPIFA2Q96DR5 249 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 TUBA1CQ9BQE3 449 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 NAA11Q9BSU3 229 aaPredicted RBP13.83□□□□□ -0.2
DDB1-216ENST00000539739 PTDSS2Q9BVG9 487 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
DDB1-216ENST00000539739 NANSQ9NR45 359 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 VNN3Q9NY84 501 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 CORINQ9Y5Q5 1042 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 SHANK1Q9Y566 2161 aa13.83□□□□□ -0.2
DDB1-216ENST00000539739 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 PIP5K1CO60331 668 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 HIST1H2ABP04908 130 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 ENPP1P22413 925 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 BCAP31P51572 246 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 IST1P53990 364 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 CTBP2P56545 445 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 C19orf57Q0VDD7 668 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 ZNF74Q16587 644 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 HIST3H2AQ7L7L0 130 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 MAMDC2Q7Z304 686 aaPredicted RBP13.82□□□□□ -0.2
DDB1-216ENST00000539739 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 OR5K1Q8NHB7 308 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 GIPC3Q8TF64 312 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 HIST1H2ACQ93077 130 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 NRBF2Q96F24 287 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 PKP2Q99959 881 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 ASPNQ9BXN1 380 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 MRPS26Q9BYN8 205 aaKnown RBP13.82□□□□□ -0.2
DDB1-216ENST00000539739 PRRG4Q9BZD6 226 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 SEMA6AQ9H2E6 1030 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 FKRPQ9H9S5 495 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 C20orf141Q9NUB4 165 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 SMG1Q96Q15 3661 aaKnown RBP13.82□□□□□ -0.2
DDB1-216ENST00000539739 MPDZO75970 2070 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 CLCA1A8K7I4 914 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 OR7A10O76100 309 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 BGLAPP02818 100 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 FUT1P19526 365 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 CBLP22681 906 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 LSM11P83369 360 aaKnown RBP eCLIP13.82□□□□□ -0.2
DDB1-216ENST00000539739 MED21Q13503 144 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 EMC4Q5J8M3 183 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 HMBOX1Q6NT76 420 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
DDB1-216ENST00000539739 HIPK1Q86Z02 1210 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 NRG4Q8WWG1 115 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 SDCCAG3Q96C92 435 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 ZNF845Q96IR2 970 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms