RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 WBP11Q9Y2W2 641 aaKnown RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 A0A1W2PQ72 361 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TMEM72A0PK05 275 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 AGAP5A6NIR3 686 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 PSMG1O95456 288 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 AK1P00568 194 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 IFNGP01579 166 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 RAP2AP10114 183 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 HSD11B1P28845 292 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 SMSP52788 366 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CSNK2A1P68400 391 aaPredicted RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 FMODQ06828 376 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ZNF658BQ4V348 819 aaPredicted RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 GTF2IRD2BQ6EKJ0 949 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 C3orf33Q6P1S2 294 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 DBX2Q6ZNG2 339 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 Q71RC1 249 aaPredicted RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 GTF2IRD2Q86UP8 949 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 MSRB3Q8IXL7 192 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 M1APQ8TC57 530 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 UBE2FQ969M7 185 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 WDR34Q96EX3 536 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TXNDC15Q96J42 360 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TAAR6Q96RI8 345 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 GPER1Q99527 375 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 UBTD1Q9HAC8 227 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 VCX3AQ9NNX9 186 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 UFSP2Q9NUQ7 469 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 RELNP78509 3460 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TUBAL3A6NHL2 446 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 LGI1O95970 557 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 PABPC4LP0CB38 370 aaKnown RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 DCLRE1CQ96SD1 692 aaKnown RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 SPATA9Q9BWV2 254 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 FAM192AQ9GZU8 254 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ERRFI1Q9UJM3 462 aaPredicted RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 NBEAQ8NFP9 2946 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 A0A0J9YW62 118 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ACOX3O15254 700 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 SLC2A10O95528 541 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 DRD5P21918 477 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 HCCSP53701 268 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 CDC42P60953 191 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 CSNK2BP67870 215 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 TGFBR3Q03167 851 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 FUT7Q11130 342 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 NKPD1Q17RQ9 610 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 NHSL2Q5HYW2 709 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 SLC16A14Q7RTX9 510 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ZNF615Q8N8J6 731 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ZNF540Q8NDQ6 660 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 OR8J3Q8NGG0 315 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 MOSPD2Q8NHP6 518 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 SLC7A13Q8TCU3 470 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 SLC7A6OSQ96CW6 309 aaPredicted RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 PLEKHA1Q9HB21 404 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 PRPF19Q9UMS4 504 aaKnown RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 ATP23Q9Y6H3 246 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ENPP4Q9Y6X5 453 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 TMEM131Q92545 1883 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 J3QLW9 94 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 FBXO45P0C2W1 286 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ZNF19P17023 458 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ADAM5Q6NVV9 412 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 LYPD4Q6UWN0 246 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 PQLC1Q8N2U9 271 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 AKR7LQ8NHP1 331 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 MOGAT1Q96PD6 335 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 SH3GL3Q99963 347 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 MMADHCQ9H3L0 296 aaPredicted RBP6.53□□□□□ -1.36
MSH6-209ENST00000538136 Q9H521 79 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 C20orf141Q9NUB4 165 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ASB6Q9NWX5 421 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 ACTR3BQ9P1U1 418 aa6.53□□□□□ -1.36
MSH6-209ENST00000538136 OR6C70A6NIJ9 312 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 GJE1A6NN92 205 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PRR23D1E9PI22 279 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 FXYD1O00168 92 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 RAMP1O60894 148 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 NOL3O60936 208 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 NEURL1O76050 574 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ATE1O95260 518 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 TFPTP0C1Z6 253 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PRR23D2P0DMB1 279 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 SMIM10L1P0DMW3 83 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 SLC1A3P43003 542 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 GSTM5P46439 218 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 POLR2HP52434 150 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 CEACAM16Q2WEN9 425 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 GRINAQ7Z429 371 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PM20D2Q8IYS1 436 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 FAM109AQ8N4B1 249 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 LSM14AQ8ND56 463 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 OR2V1Q8NHB1 315 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 HSD17B8Q92506 261 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 SMIM10Q96HG1 83 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 AMBRA1Q9C0C7 1298 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms