RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FLRT2O43155 660 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 LYPD3O95274 346 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 MT-ND4P03905 459 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 SPI1P17947 270 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 HOXD12P35452 270 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 GPR3P46089 330 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 CCR6P51684 374 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 PLCXD2Q0VAA5 305 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 TDGQ13569 410 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 SDR16C5Q8N3Y7 309 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ARIH2OSQ8N7S6 290 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 TOR1AIP2Q8NFQ8 470 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 CHAC2Q8WUX2 184 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ITFG2Q969R8 447 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZDHHC12Q96GR4 267 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 NUDT22Q9BRQ3 303 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ALG12Q9BV10 488 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 RTN4RQ9BZR6 473 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 NUDT15Q9NV35 164 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 NTMQ9P121 344 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 GVINP1Q7Z2Y8 2422 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 MEIS3P1A6NDR6 274 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 SHISA8B8ZZ34 492 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 DCTN6O00399 190 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 EIF1AYO14602 144 aaKnown RBP7.96□□□□□ -1.14
UBE3B-208ENST00000538070 FZD7O75084 574 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 PTP4A3O75365 173 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 WISP1O95388 367 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 TFPIP10646 304 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 FGF9P31371 208 aaPredicted RBP7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ADH7P40394 386 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 DHPSP49366 369 aaPredicted RBP7.96□□□□□ -1.14
UBE3B-208ENST00000538070 HNRNPKP61978 463 aaKnown RBP eCLIP7.96□□□□□ -1.14
UBE3B-208ENST00000538070 SIRPAP78324 504 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 PRTGQ2VWP7 1150 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 HSD17B12Q53GQ0 312 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZCCHC12Q6PEW1 402 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 MRGPREQ86SM8 312 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF676Q8N7Q3 588 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 OR6F1Q8NGZ6 308 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 GPR119Q8TDV5 335 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 DUSP19Q8WTR2 217 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 RFT1Q96AA3 541 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF524Q96C55 264 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ITPKCQ96DU7 683 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF649Q9BS31 505 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 SLC2A4RGQ9NR83 387 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 MRPS18AQ9NVS2 196 aaKnown RBP7.96□□□□□ -1.14
UBE3B-208ENST00000538070 NCDNQ9UBB6 729 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 CTSFQ9UBX1 484 aa7.96□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF749O43361 778 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 NSA2O95478 260 aaKnown RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 PRKCAP17252 672 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 DGCR2P98153 550 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FGFBP1Q14512 234 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 MELKQ14680 651 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FAAP20Q6NZ36 180 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 METAP1DQ6UB28 335 aaPredicted RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF527Q8NB42 609 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF485Q8NCK3 441 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 SLC2A12Q8TD20 617 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FAM131CQ96AQ9 280 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 ABHD1Q96SE0 405 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 NUDT9Q9BW91 350 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 UBQLN4Q9NRR5 601 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 RXFP3Q9NSD7 469 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 PRODH2Q9UF12 536 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 PI4KAP42356 2102 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 SHISA7A6NL88 538 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 SOX1O00570 391 aaPredicted RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 SMAD9O15198 467 aaKnown RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF264O43296 627 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 TOXO94900 526 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 ATF1P18846 271 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FBLP22087 321 aaKnown RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 RPS4Y1P22090 263 aaKnown RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 CD27P26842 260 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 GIFP27352 417 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 RORAP35398 523 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 CCR5P51681 352 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FZD5Q13467 585 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 NTRK2Q16620 822 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 CEP78Q5JTW2 689 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 RPL13AP3Q6NVV1 102 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 FAM220AQ7Z4H9 259 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 GPALPP1Q8IXQ4 340 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 PM20D2Q8IYS1 436 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 TOMM5Q8N4H5 51 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 OR2I1PQ8NGU4 316 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 OR1L3Q8NH93 324 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 LGALS14Q8TCE9 139 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.95□□□□□ -1.14
UBE3B-208ENST00000538070 WDR76Q9H967 626 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 LAMP5Q9UJQ1 280 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 SPTBN2O15020 2390 aa7.95□□□□□ -1.14
UBE3B-208ENST00000538070 A0A0B4J293 547 aa7.94□□□□□ -1.14
UBE3B-208ENST00000538070 TMEM221A6NGB7 291 aa7.94□□□□□ -1.14
UBE3B-208ENST00000538070 H3BML4 177 aa7.94□□□□□ -1.14
UBE3B-208ENST00000538070 XKRYO14609 159 aa7.94□□□□□ -1.14
UBE3B-208ENST00000538070 SPARCP09486 303 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms