RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 NOX1Q9Y5S8 564 aa9.55□□□□□ -0.88
CLPB-208ENST00000538021 NUP214P35658 2090 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 ZNF503-AS2A6NEH8 195 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 AQP7P3A6NL99 342 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 DUXAA6NLW8 204 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 RP2O75695 350 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 AK1P00568 194 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 UROSP10746 265 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 BCKDHAP12694 445 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 MATN1P21941 496 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 TACR3P29371 465 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 GCH1P30793 250 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 POLR2HP52434 150 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 SH3BGRP55822 239 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 MRPS11P82912 194 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 SRSF4Q08170 494 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 ALKBH6Q3KRA9 238 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 LSM12Q3MHD2 195 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 GALNTL6Q49A17 601 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 CFAP157Q5JU67 520 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 GKAP1Q5VSY0 366 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 LIPMQ5VYY2 423 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 LEG1Q6P5S2 330 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 CREB3L2Q70SY1 520 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ZNF771Q7L3S4 317 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 DOK3Q7L591 496 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ARFGAP2Q8N6H7 521 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 FAM71CQ8NEG0 241 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 OR2T11Q8NH01 316 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 SFXN5Q8TD22 340 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 DVL3Q92997 716 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 SLC25A28Q96A46 364 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 MOAP1Q96BY2 351 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 FCRL1Q96LA6 429 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 CCT8L2Q96SF2 557 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ZNF350Q9GZX5 532 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ADPRHL2Q9NX46 363 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 MYEF2Q9P2K5 600 aaKnown RBP9.54□□□□□ -0.88
CLPB-208ENST00000538021 OPN4Q9UHM6 478 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ATP6V1HQ9UI12 483 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 DUSP13Q9UII6 198 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 ZNF180Q9UJW8 692 aa9.54□□□□□ -0.88
CLPB-208ENST00000538021 A0A1W2PPW3 197 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 LIPT2A6NK58 231 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 CLDN24A6NM45 220 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 H3BQF6 201 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 AP3D1O14617 1153 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 DEAF1O75398 565 aaPredicted RBP9.53□□□□□ -0.88
CLPB-208ENST00000538021 FSHBP01225 129 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 RNASE1P07998 156 aaKnown RBP9.53□□□□□ -0.88
CLPB-208ENST00000538021 OMGP23515 440 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 PCGF2P35227 344 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 RPL3P39023 403 aaKnown RBP9.53□□□□□ -0.88
CLPB-208ENST00000538021 RAD52P43351 418 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 MAGEB1P43366 347 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 ARHGAP11BQ3KRB8 267 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 GLIPR1L2Q4G1C9 344 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 FRMD7Q6ZUT3 714 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 C1QL4Q86Z23 238 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 CLEC4FQ8N1N0 589 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 PSMA8Q8TAA3 256 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 RAB8BQ92930 207 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 FUT8Q9BYC5 575 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 PIF1Q9H611 641 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 EXD2Q9NVH0 621 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 PDP1Q9P0J1 537 aaPredicted RBP9.53□□□□□ -0.88
CLPB-208ENST00000538021 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 WDR45Q9Y484 360 aa9.53□□□□□ -0.88
CLPB-208ENST00000538021 SEC14L2O76054 403 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 IGHV2-5P01817 119 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 LINC00032P0C843 101 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 MYL2P10916 166 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 NEFHP12036 1026 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 GATA3P23771 443 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 GLRXP35754 106 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 KCNJ10P78508 379 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 LCN2P80188 198 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 GALK2Q01415 458 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 SLC7A5Q01650 507 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 TRMT5Q32P41 509 aaKnown RBP9.52□□□□□ -0.89
CLPB-208ENST00000538021 ARMCX4Q5H9R4 360 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 TYW3Q6IPR3 259 aaKnown RBP9.52□□□□□ -0.89
CLPB-208ENST00000538021 C17orf107Q6ZR85 190 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 C6orf120Q7Z4R8 191 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 EPHX4Q8IUS5 362 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 WDFY1Q8IWB7 410 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 BCL6BQ8N143 479 aaPredicted RBP9.52□□□□□ -0.89
CLPB-208ENST00000538021 KIF18AQ8NI77 898 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 TMIGD2Q96BF3 282 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 ZG16BQ96DA0 208 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 CCDC126Q96EE4 140 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 SLC35G5Q96KT7 338 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 GPA33Q99795 319 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 TAPBPLQ9BX59 468 aa9.52□□□□□ -0.89
CLPB-208ENST00000538021 LINC00470Q9BZP3 86 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms