RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CDS1Q92903 461 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SGIP1Q9BQI5 828 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SCML1Q9UN30 329 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ETV7Q9Y603 341 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PARP14Q460N5 1801 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 FAM221BA6H8Z2 402 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RPL17P18621 184 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 NPY4RP50391 375 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CCR9P51686 369 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CAMK2BQ13554 666 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 NNATQ16517 81 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 KDELC1Q6UW63 502 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CLEC20AQ6ZU45 233 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CAMKVQ8NCB2 501 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR14C36Q8NHC7 312 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PPTC7Q8NI37 304 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ALKBH4Q9NXW9 302 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ALDOCP09972 364 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CTRB1P17538 263 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RPL29P47914 159 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CCINQ13939 588 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CTRB2Q6GPI1 263 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 BRICD5Q6PL45 260 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 DYNC2LI1Q8TCX1 351 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CYB5D2Q8WUJ1 264 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CRTAC1Q9NQ79 661 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF142P52746 1687 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SLIT2O94813 1529 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF98A6NK75 572 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RNASEK-C17orf49H0YIS7 233 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GRIN3BO60391 1043 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 LRP3O75074 770 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 FGF7P21781 194 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GABRR1P24046 479 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ARRB2P32121 409 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 EEF1A2Q05639 463 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 LMNTD1Q8N9Z9 388 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR52N2Q8NGI0 321 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR6F1Q8NGZ6 308 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SLC16A10Q8TF71 515 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ACTL8Q9H568 366 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MROH6A6NGR9 719 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 A6NIZ1 184 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GPR171O14626 319 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SLC31A1O15431 190 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CSF3P09919 207 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RAP1BP61224 184 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RAB1AP62820 205 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 HBG1P69891 147 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 HBG2P69892 147 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SIM1P81133 766 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 AQP6Q13520 282 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 IRF4Q15306 451 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PCK2Q16822 640 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF528Q3MIS6 628 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TRIM61Q5EBN2 209 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM71Q6P5X7 295 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ISCA2Q86U28 154 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ARRDC4Q8NCT1 418 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GPR174Q9BXC1 333 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SYT7O43581 403 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ASGR2P07307 311 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MTHFD2P13995 350 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF33AQ06730 810 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 EXOSC6Q5RKV6 272 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PIP5KL1Q5T9C9 394 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZDHHC14Q8IZN3 488 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OR4K14Q8NGD5 310 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OR13C5Q8NGS8 318 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 C3orf30Q96M34 536 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SRRQ9GZT4 340 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TP53TG5Q9Y2B4 290 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CSTAP01040 98 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 EPHX1P07099 455 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SHC1P29353 583 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GPR143P51810 404 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MAP2K6P52564 334 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GRB2P62993 217 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 REEP5Q00765 189 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 FRMPD2BQ6IN97 320 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LINC00299Q6ZSB3 139 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SUMF1Q8NBK3 374 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ANKRD9Q96BM1 317 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 FAM122AQ96E09 287 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 C12orf42Q96LP6 360 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MBOAT4Q96T53 435 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF816-ZNF321PA0A0X1KG74 233 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TRDV1A0A1B0GX56 115 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ACOD1A6NK06 481 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ADM5C9JUS6 153 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TRAPPC6AO75865 159 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CPNE6O95741 557 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 IGFBP1P08833 259 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 C5AR1P21730 350 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CCNOP22674 350 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms