RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ARHGAP40Q5TG30 622 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 RHBDD2Q6NTF9 364 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SFXN4Q6P4A7 337 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 RPL22L1Q6P5R6 122 aaKnown RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 LRRC28Q86X40 367 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 Q8N9G6 341 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 GHSRQ92847 366 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 CCDC74AQ96AQ1 378 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 NUDT22Q9BRQ3 303 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 YIPF2Q9BWQ6 316 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 KLHL1Q9NR64 748 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 FGF21Q9NSA1 209 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PPIEQ9UNP9 301 aaKnown RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SRPK3Q9UPE1 567 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 KNL1Q8NG31 2342 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SELENOFO60613 162 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TRAPPC2P0DI81 140 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TRAPPC2BP0DI82 140 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ELK1P19419 428 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 MYL9P24844 172 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TACR3P29371 465 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 OR2B6P58173 313 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SIRPAP78324 504 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SLC3A1Q07837 685 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 NSDHLQ15738 373 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 FAM27D1Q5T7N8 215 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF517Q6ZMY9 492 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TMPRSS9Q7Z410 1059 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 CEACAM19Q7Z692 300 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TAAR8Q969N4 342 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 KTI12Q96EK9 354 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 NANSQ9NR45 359 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 NPFFR2Q9Y5X5 522 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 NPIPB7O75200 414 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 GATBO75879 557 aaKnown RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 ABCD3P28288 659 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 IL12BP29460 328 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 GBX2P52951 348 aaPredicted RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 DLX5P56178 289 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 RPL18Q07020 188 aaKnown RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 ACSM3Q53FZ2 586 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 ALG10Q5BKT4 473 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 TMEM71Q6P5X7 295 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF574Q6ZN55 896 aaPredicted RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 RABEPKQ7Z6M1 372 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 LSM14AQ8ND56 463 aaKnown RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 PHYHIPQ92561 330 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 OMA1Q96E52 524 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 MRPL48Q96GC5 212 aaKnown RBP8.46□□□□□ -1.05
UBE3B-207ENST00000537063 Q96M85 177 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 TSPAN32Q96QS1 320 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 GAL3ST4Q96RP7 486 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 MARCH7Q9H992 704 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 COPS7AQ9UBW8 275 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 CTSFQ9UBX1 484 aa8.46□□□□□ -1.05
UBE3B-207ENST00000537063 CCDC163A0A0D9SF12 145 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 A0A1B0GTQ1 180 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 PRR32B1ATL7 298 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 GPRIN2O60269 458 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 NPR2P20594 1047 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 EPHA8P29322 1005 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 RBMS1P29558 406 aaKnown RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 NAA10P41227 235 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 GDI2P50395 445 aaKnown RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 PLCXD2Q0VAA5 305 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 MESTQ5EB52 335 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 CEP78Q5JTW2 689 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 ZNF544Q6NX49 715 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 LEG1Q6P5S2 330 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 SLC29A4Q7RTT9 530 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 SLC16A9Q7RTY1 509 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 RAB43Q86YS6 212 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 PRR22Q8IZ63 422 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 Q8N402 240 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 RNF138Q8WVD3 245 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 SNX18Q96RF0 628 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 ALG12Q9BV10 488 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 PTDSS2Q9BVG9 487 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 USP34Q70CQ2 3546 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 C4orf47A7E2U8 309 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 B4DXG7 233 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 SLC2A2P11168 524 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 MYF5P13349 255 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 ACVR1BP36896 505 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 CCR4P51679 360 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 TAB1Q15750 504 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 SNAP47Q5SQN1 464 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 GPR139Q6DWJ6 353 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 NFAM1Q8NET5 270 aaPredicted RBP8.46□□□□□ -1.06
UBE3B-207ENST00000537063 NRSN2Q9GZP1 204 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 ACOXLQ9NUZ1 547 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
UBE3B-207ENST00000537063 ARID1BQ8NFD5 2236 aaPredicted RBP8.45□□□□□ -1.06
UBE3B-207ENST00000537063 TRAV36DV7A0A075B6V5 113 aa8.45□□□□□ -1.06
UBE3B-207ENST00000537063 OR6C70A6NIJ9 312 aa8.45□□□□□ -1.06
UBE3B-207ENST00000537063 ABHD16AO95870 558 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms