RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 RFC3P40938 356 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ENTPD1P49961 510 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 CTBP2P56545 445 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 FXYD6P3P58550 94 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TMED1Q13445 227 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 KLHL26Q53HC5 615 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ARMC10Q8N2F6 343 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 CADM2Q8N3J6 435 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TMEM156Q8N614 296 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ST6GALNAC3Q8NDV1 305 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 OR52I1Q8NGK6 324 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 FNDC8Q8TC99 324 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ABTB1Q969K4 478 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 SCMH1Q96GD3 660 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ZNF426Q9BUY5 554 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 UBQLN3Q9H347 655 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 MYOTQ9UBF9 498 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RPS6KB2Q9UBS0 482 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ERRFI1Q9UJM3 462 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 OSGIN2Q9Y236 505 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 LSM2Q9Y333 95 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 MAST4O15021 2626 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 DIDO1Q9BTC0 2240 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 FRG2CA6NGY1 282 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RAB36O95755 333 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 IL33O95760 270 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 HMGN1P05114 100 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 SAGP10523 405 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 CD46P15529 392 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TBXA2RP21731 343 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 TGFBR1P36897 503 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RBM34P42696 430 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 CLK1P49759 484 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 GPR85P60893 370 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RNF4P78317 190 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 DOC2BQ14184 412 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 KLHL22Q53GT1 634 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 RNLSQ5VYX0 342 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 SLC25A25Q6KCM7 469 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 IL20RBQ6UXL0 311 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 C9orf40Q8IXQ3 194 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 OR52L1Q8NGH7 329 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 OR13C2Q8NGS9 318 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ADIPOR1Q96A54 375 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 LCORQ96JN0 433 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 GAL3ST4Q96RP7 486 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 MND1Q9BWT6 205 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 UBQLN4Q9NRR5 601 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 FAIMQ9NVQ4 179 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 MRPS18AQ9NVS2 196 aaKnown RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 SLC35A3Q9Y2D2 325 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 C2orf92A0A1B0GVN3 265 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 RCBTB2O95199 551 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 NGFRP08138 427 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 EDN3P14138 238 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 BMP7P18075 431 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 GRK5P34947 590 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 SOX3P41225 446 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 MTNR1AP48039 350 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 SSR4P51571 173 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 RAB40BQ12829 278 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 TSTQ16762 297 aaKnown RBP10.81□□□□□ -0.68
CLIP1-208ENST00000537004 RPL13AP3Q6NVV1 102 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 NANOGP1Q8N7R0 232 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 ZNF527Q8NB42 609 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 DYNC2LI1Q8TCX1 351 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 ZHX1-C8orf76Q96EF9 292 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 RNFT2Q96EX2 444 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 ART5Q96L15 291 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 C5orf34Q96MH7 638 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 FRMD6Q96NE9 622 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 RASL10BQ96S79 203 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 HOXD1Q9GZZ0 328 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 ENKD1Q9H0I2 346 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 MRTO4Q9UKD2 239 aaKnown RBP10.81□□□□□ -0.68
CLIP1-208ENST00000537004 SIGLEC7Q9Y286 467 aa10.81□□□□□ -0.68
CLIP1-208ENST00000537004 IRGMA1A4Y4 181 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 SYNDIG1LA6NDD5 238 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 CYSRT1A8MQ03 144 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 G3V3Y1 287 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 BHLHE40O14503 412 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 MYL12BO14950 172 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 UTS2O95399 124 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 SLC2A10O95528 541 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 INHBBP09529 407 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 HPGDP15428 266 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 NR0B1P51843 470 aaKnown RBP10.8□□□□□ -0.68
CLIP1-208ENST00000537004 GAS1P54826 345 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 CDH11P55287 796 aa10.8□□□□□ -0.68
CLIP1-208ENST00000537004 EBPQ15125 230 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms