RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NPIPB7O75200 414 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 ETS2P15036 469 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 PPIBP23284 216 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 IDH3AP50213 366 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 P2RY4P51582 365 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 NUDT6P53370 316 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 HOXC5Q00444 222 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 ELOA3BQ3SY89 546 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 GCNT6Q5T4J0 391 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 ZNF544Q6NX49 715 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 BLOC1S3Q6QNY0 202 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 CREB3L2Q70SY1 520 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 KRT73Q86Y46 540 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 ELOA3Q8NG57 546 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 MFSD8Q8NHS3 518 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 SLC25A36Q96CQ1 311 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 SPDL1Q96EA4 605 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 RHNO1Q9BSD3 238 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 CCDC28BQ9BUN5 200 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 SLCO1B3Q9NPD5 702 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 OBP2BQ9NPH6 170 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 TMEM45AQ9NWC5 275 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 CCDC167Q9P0B6 97 aa14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 HEATR1Q9H583 2144 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-204ENST00000535313 ZNF587BE7ETH6 402 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 BMP4P12644 408 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 HOXB9P17482 250 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 PRKAR1BP31321 381 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 SELENOPP49908 381 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 IRX1P78414 480 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 SLC25A3Q00325 362 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 RAB35Q15286 201 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 LRIF1Q5T3J3 769 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 C11orf71Q6IPW1 123 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 NIPAL3Q6P499 406 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 B3GLCTQ6Y288 498 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 DNM1P46Q6ZS02 220 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 HDXQ7Z353 690 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 FUNDC1Q8IVP5 155 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 NFKBIDQ8NI38 313 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 DYDC1Q8WWB3 177 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 EBF4Q9BQW3 602 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 SPATA5L1Q9BVQ7 753 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 VIPAS39Q9H9C1 493 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 ARGLU1Q9NWB6 273 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 SLC25A37Q9NYZ2 338 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 ABCA1O95477 2261 aa14.17□□□□□ -0.14
CLSTN3-204ENST00000535313 LGI1O95970 557 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 ARAFP10398 606 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 PNMTP11086 282 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 PAX7P23759 505 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 RPS5P46782 204 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 AQP5P55064 265 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 DSCR9P59020 149 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 UBE2NP61088 152 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 CDK6Q00534 326 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 KRTAP1-1Q07627 177 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 HIKESHIQ53FT3 197 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 REEP3Q6NUK4 255 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 CLEC2AQ6UVW9 174 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 PRIMA1Q86XR5 153 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 EPHX4Q8IUS5 362 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 BOD1Q96IK1 185 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 ATP6V1G3Q96LB4 118 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 C12orf10Q9HB07 376 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 SLAMF8Q9P0V8 285 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 CORO2BQ9UQ03 480 aa14.16□□□□□ -0.14
CLSTN3-204ENST00000535313 ATP6V1G2-DDX39BF2Z307 99 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 OR2T1O43869 369 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 ZNF43P17038 809 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 APOBEC3AP31941 199 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 TBRG1Q3YBR2 411 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 AGKQ53H12 422 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 HMBOX1Q6NT76 420 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 DHRS4L2Q6PKH6 230 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 C5orf46Q6UWT4 87 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 C6orf89Q6UWU4 347 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 MSRB3Q8IXL7 192 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 OR1K1Q8NGR3 316 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 DNAJA4Q8WW22 397 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 KTI12Q96EK9 354 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 ALKBH3Q96Q83 286 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 ZNF607Q96SK3 696 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 KCNS3Q9BQ31 491 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 PTDSS2Q9BVG9 487 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 SELENONQ9NZV5 590 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 VAPAQ9P0L0 249 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 PMF1-BGLAPU3KQ54 211 aa14.15□□□□□ -0.14
CLSTN3-204ENST00000535313 A0A1B0GWA3 101 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 EVPLLA8MZ36 301 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 FTCDNL1E5RQL4 147 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 H7C417 338 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 AIM2O14862 343 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 CRLF1O75462 422 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 SLC6A2P23975 617 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 ATP4BP51164 291 aa14.14□□□□□ -0.15
CLSTN3-204ENST00000535313 CLDN17P56750 224 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms