RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 ACTRT3Q9BYD9 372 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 SRXN1Q9BYN0 137 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 OR10A4Q9H209 315 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 PIGUQ9H490 435 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 CXorf36Q9H7Y0 433 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 ANKZF1Q9H8Y5 726 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 ZCCHC3Q9NUD5 404 aaKnown RBP4.58□□□□□ -1.68
ATM-224ENST00000534625 MRPS18AQ9NVS2 196 aaKnown RBP4.58□□□□□ -1.68
ATM-224ENST00000534625 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 ADAM21Q9UKJ8 722 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 ICAM5Q9UMF0 924 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 GPR52Q9Y2T5 361 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 SNX8Q9Y5X2 465 aa4.58□□□□□ -1.68
ATM-224ENST00000534625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATM-224ENST00000534625 PRSS29PA6NIE9 313 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 LINC00473A8K010 186 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 TMEM114B3SHH9 223 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 GTPBP1O00178 669 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 F2RL2O00254 374 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 HS3ST1O14792 307 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 SPAG7O75391 227 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 LYPLA1O75608 230 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 SOX30O94993 753 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 C6orf47O95873 294 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 NUDT17P0C025 328 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 CREB1P16220 341 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 DDX5P17844 614 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 PRPS1L1P21108 318 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 MALP21145 153 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ATP6V1C1P21283 382 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ELK4P28324 431 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 HPCAL1P37235 193 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 RPL3P39023 403 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 P2RX1P51575 399 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ATP12AP54707 1039 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 NR1H2P55055 460 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 SUMO3P55854 103 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 HBA1P69905 142 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 CAPRIN1Q14444 709 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 TSC22D1Q15714 1073 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 NDUFAF6Q330K2 333 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ATP6AP1LQ52LC2 224 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 SLC25A53Q5H9E4 307 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 DCST2Q5T1A1 773 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 PDSS1Q5T2R2 415 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 TFAP2EQ6VUC0 442 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ZNF704Q6ZNC4 412 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 PLEKHM3Q6ZWE6 761 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 TUSC5Q8IXB3 177 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 GABRG1Q8N1C3 465 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 RIBC1Q8N443 379 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 FNDC5Q8NAU1 212 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ZNF527Q8NB42 609 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 OR5W2Q8NH69 310 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 OR5AK3PQ8NH89 298 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 LILRB1Q8NHL6 650 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 RAB3IL1Q8TBN0 382 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 AGR3Q8TD06 166 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 SFXN5Q8TD22 340 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 TCP10LQ8TDR4 215 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ADAMTS15Q8TE58 950 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATM-224ENST00000534625 AKAP1Q92667 903 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATM-224ENST00000534625 CPNE4Q96A23 557 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 S100PBPQ96BU1 408 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 CHMP6Q96FZ7 201 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 OR7D2Q96RA2 312 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 SDF2Q99470 211 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 VRK1Q99986 396 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 C1orf50Q9BV19 199 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 ACTR6Q9GZN1 396 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 HOXD1Q9GZZ0 328 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 COQ10BQ9H8M1 238 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 EML4Q9HC35 981 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 KLHL13Q9P2N7 655 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 LGALS13Q9UHV8 139 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 FAF1Q9UNN5 650 aaPredicted RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 CARD8Q9Y2G2 431 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 FBN1P35555 2871 aaKnown RBP4.57□□□□□ -1.68
ATM-224ENST00000534625 DNHD1Q96M86 4753 aa4.57□□□□□ -1.68
ATM-224ENST00000534625 UQCRHLA0A096LP55 91 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 IGHV3-15A0A0B4J1V0 119 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 DNAJC9-AS1A6NH13 148 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 SERINC4A6NH21 518 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 GJE1A6NN92 205 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 ZNF814B7Z6K7 855 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 C9JVG2 144 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 H3BNH8 94 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 CFLARO15519 480 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 ITM2AO43736 263 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 TYROBPO43914 113 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 EIF4E2O60573 245 aaKnown RBP4.56□□□□□ -1.68
ATM-224ENST00000534625 FCMRO60667 390 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 SCN2BO60939 215 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 TMCC2O75069 709 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 SKAP2O75563 359 aaPredicted RBP4.56□□□□□ -1.68
ATM-224ENST00000534625 NUDT14O95848 222 aa4.56□□□□□ -1.68
ATM-224ENST00000534625 ADAP00813 363 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms