RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CACNA1F	O60840	1977 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	TIAM2	Q8IVF5	1701 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979		A0A1W2PPV4	95 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF724	A8MTY0	619 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	NEDD8-MDP1	E9PL57	170 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979		F5H6K3	240 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	HIP1	O00291	1037 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	POLR1C	O15160	346 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PPIH	O43447	177 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	CLPX	O76031	633 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	TMEM50A	O95807	157 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	JCHAIN	P01591	159 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MB	P02144	154 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	RPLP0	P05388	317 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	HBQ1	P09105	142 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	EDNRA	P25101	427 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	GPR183	P32249	361 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	STK19	P49842	368 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	EMD	P50402	254 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	XG	P55808	180 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MAP3K7CL	P57077	242 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	SLC8A3	P57103	927 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	B2M	P61769	119 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	OTUD4	Q01804	1114 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ZFP36L1	Q07352	338 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	KLRC3	Q07444	240 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	EIF2B1	Q14232	305 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ITIH4	Q14624	930 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	KIAA1644	Q3SXP7	199 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	GLYR1	Q49A26	553 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MLIP	Q5VWP3	458 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	WSCD1	Q658N2	575 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PDPK2P	Q6A1A2	396 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	DEGS2	Q6QHC5	323 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ENPP6	Q6UWR7	440 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	C6orf89	Q6UWU4	347 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	HSDL2	Q6YN16	418 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	SCARA5	Q6ZMJ2	495 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MOB2	Q70IA6	237 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	TSEN54	Q7Z6J9	526 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MYPOP	Q86VE0	399 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	VRK2	Q86Y07	508 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	NKAIN4	Q8IVV8	208 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MFSD6L	Q8IWD5	586 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	CD302	Q8IX05	232 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	OR9Q2	Q8NGE9	314 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	OR2T11	Q8NH01	316 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	RHEBL1	Q8TAI7	183 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PAQR8	Q8TEZ7	354 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	MAIP1	Q8WWC4	291 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PIBF1	Q8WXW3	757 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	TADA1	Q96BN2	335 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	FMO2	Q99518	471 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	ATP13A3	Q9H7F0	1226 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PLEKHA3	Q9HB20	300 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	NMUR1	Q9HB89	426 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PTTG3P	Q9NZH4	202 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	AK6	Q9Y3D8	172 aa	Known RBP	3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PCDH11X	Q9BZA7	1347 aa		3.87	□□□□□ -1.79
ATM-223	ENST00000533979	PIEZO1	Q92508	2521 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979		A0A1B0GUH1	482 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF195	O14628	629 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	BCKDK	O14874	412 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ZW10	O43264	779 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	DUSP11	O75319	330 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	CABYR	O75952	493 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	PDE5A	O76074	875 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	NGF	P01138	241 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	EDN1	P05305	212 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	MYOG	P15173	224 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	STOM	P27105	288 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	RPL9	P32969	192 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	RPL4	P36578	427 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	HLCS	P50747	726 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	PSMD7	P51665	324 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	DSTN	P60981	165 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	CDK16	Q00536	496 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF85	Q03923	595 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	SLA	Q13239	276 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	PPIL2	Q13356	520 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	RAB35	Q15286	201 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	MRPL23	Q16540	153 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	KLHL38	Q2WGJ6	581 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF829	Q3KNS6	432 aa	Predicted RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	C1orf220	Q5T0J3	134 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	WDR25	Q64LD2	544 aa	Predicted RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	SLC25A25	Q6KCM7	469 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	PRR5L	Q6MZQ0	368 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ADAMTSL5	Q6ZMM2	481 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	APTX	Q7Z2E3	356 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	RNF130	Q86XS8	419 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	SLC35F2	Q8IXU6	374 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	SYCE1	Q8N0S2	351 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	ASCC1	Q8N9N2	400 aa	Known RBP	3.86	□□□□□ -1.79
ATM-223	ENST00000533979	OR5T2	Q8NGG2	359 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	FAM110B	Q8TC76	370 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	DDI1	Q8WTU0	396 aa		3.86	□□□□□ -1.79
ATM-223	ENST00000533979	BIRC7	Q96CA5	298 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms