RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SFXN3Q9BWM7 321 aa13.92□□□□□ -0.18
CTTN-215ENST00000533931 BCO1Q9HAY6 547 aa13.92□□□□□ -0.18
CTTN-215ENST00000533931 CHST11Q9NPF2 352 aa13.92□□□□□ -0.18
CTTN-215ENST00000533931 EMC3Q9P0I2 261 aa13.92□□□□□ -0.18
CTTN-215ENST00000533931 ZNF716A6NP11 495 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 M0R082 166 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 KPNA4O00629 521 aaPredicted RBP13.91□□□□□ -0.18
CTTN-215ENST00000533931 GNGT2O14610 69 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 LRRTM2O43300 516 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 AQP8O94778 261 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 CH25HO95992 272 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 HIST1H2ABP04908 130 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 IFI30P13284 250 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 FUT4P22083 530 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 OMPP47874 163 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ARHGDIAP52565 204 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 LTBQ06643 244 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ZP4Q12836 540 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 SEC23BQ15437 767 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 MICAQ29983 383 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 EXOC3L2Q2M3D2 409 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 HIST3H2AQ7L7L0 130 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 P3H2Q8IVL5 708 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 C10orf53Q8N6V4 93 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 OR5J2Q8NH18 312 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ZNF417Q8TAU3 575 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ASB5Q8WWX0 329 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 RND1Q92730 232 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 STMN2Q93045 179 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 HIST1H2ACQ93077 130 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 SLC25A36Q96CQ1 311 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ZNF587Q96SQ5 575 aaPredicted RBP13.91□□□□□ -0.18
CTTN-215ENST00000533931 C20orf141Q9NUB4 165 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 KLHL13Q9P2N7 655 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 ZNF629Q9UEG4 869 aaPredicted RBP13.91□□□□□ -0.18
CTTN-215ENST00000533931 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 MYO18BQ8IUG5 2567 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 SVILO95425 2214 aa13.91□□□□□ -0.18
CTTN-215ENST00000533931 NPIPB13A6NJU9 1138 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 EFCAB9A8MZ26 197 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 NPIPB4C9JG80 1138 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 H3BNX3 289 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 KLF4O43474 513 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 ENTPD5O75356 428 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 TIPRLO75663 272 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 TOXO94900 526 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 CCNB2O95067 398 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 AKR7A3O95154 331 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 FUT1P19526 365 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 FPR3P25089 353 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 CTSSP25774 331 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 OPRM1P35372 400 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 ERFP50548 548 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 SMSP52788 366 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 RPS4XP62701 263 aaKnown RBP13.9□□□□□ -0.18
CTTN-215ENST00000533931 RASGEF1BQ0VAM2 473 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 PMPCAQ10713 525 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 PMS2P3Q13401 168 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 SLC17A1Q14916 467 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 TAF11Q15544 211 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 TMEM225Q6GV28 225 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 ZNF770Q6IQ21 691 aaPredicted RBP13.9□□□□□ -0.18
CTTN-215ENST00000533931 C1orf94Q6P1W5 598 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 C3P1Q6ZMU1 363 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 FAM214BQ7L5A3 538 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 NANOGNBQ7Z5D8 188 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 FJX1Q86VR8 437 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 MCEMP1Q8IX19 187 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 RPRMLQ8N4K4 120 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 PYDC1Q8WXC3 89 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 ROBO4Q8WZ75 1007 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 NDEL1Q9GZM8 345 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 NTN4Q9HB63 628 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 C6orf203Q9P0P8 240 aaPredicted RBP13.9□□□□□ -0.18
CTTN-215ENST00000533931 NOX1Q9Y5S8 564 aa13.9□□□□□ -0.18
CTTN-215ENST00000533931 NBASA2RRP1 2371 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PLPP3O14495 311 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PIP5K1CO60331 668 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 OR10H3O60404 316 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 E2F6O75461 281 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PLGP00747 810 aaPredicted RBP13.89□□□□□ -0.19
CTTN-215ENST00000533931 YES1P07947 543 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
CTTN-215ENST00000533931 SAGP10523 405 aaPredicted RBP13.89□□□□□ -0.19
CTTN-215ENST00000533931 CHRNB4P30926 498 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 UQCRC1P31930 480 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PUDPQ08623 228 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PGBD2Q6P3X8 592 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 SHQ1Q6PI26 577 aaKnown RBP13.89□□□□□ -0.19
CTTN-215ENST00000533931 TBPL2Q6SJ96 375 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 PXKQ7Z7A4 578 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 OR6K3Q8NGY3 331 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 ABHD3Q8WU67 409 aa13.89□□□□□ -0.19
CTTN-215ENST00000533931 DNAJC9Q8WXX5 260 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms